Escherichia coli S17-20 |
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Putative Escherichia coli S17-20 RM systems
Ref: Liu,J. et al. unpublished
REBASE ref # 25405
| Sequence length: | GenBank #: | |
| Chromosome: | 5,206,389 bp | CP025036 |
| plasmid p1720-1: | 93,255 bp | CP031764 |
| plasmid p1720-2: | 122,736 bp | CP031765 |
REBASE acronym: EcoS1720
Org_num: 26716
All begin CWO47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8125 | endoribonuclease SymE | |||
| 8130 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.EcoS1720ORF8135P |
| 8135 | M | M.Ecocq9ORF4140P (100% identity) | TGANNNNNNNNTGCT | M.EcoS1720ORF8135P |
| 8140 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | EcoS1720ORF8135P |
| 8145 | restriction endonuclease | |||
| 13035 | M48 family peptidase | |||
| 13040 | R | Eco470ORF23895P (100% identity) | EcoS1720ORF13060P | |
| 13045 | Appr-1-p processing protein | |||
| 13050 | DUF4433 domain-containing protein | |||
| 13055 | S | S1.EcoUM1886ORF17525P (99% identity) | S.EcoS1720ORF13060P | |
| 13060 | M | M.EcoW14588ORF21505P (100% identity) | M.EcoS1720ORF13060P | |
| 13065 | 64 aa hypothetical protein | |||
| 24090 | IS21 family transposase | |||
| ??? | M | M.EcoF33ORF3585P (100% identity) | M.EcoS1720ORFBP | |
| 24105 | IS3 family transposase | |||
| 24115 | ABC transporter | |||
| 24120 | R | Kpnb12LORF3425P (100% identity) | EcoS1720ORF24130P | |
| 24125 | S | S.Kpnb12LORF3425P (100% identity) | S.EcoS1720ORF24130P | |
| 24130 | M | M.Kpnb12LORF3425P (100% identity) | M.EcoS1720ORF24130P | |
| 24135 | GTPase family protein | |||
| 26405 | 293 aa hypothetical protein | |||
| 26410 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoS1720ORF26415P |
| 26415 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoS1720ORF26415P |
| 26420 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoS1720ORF26415P |
| 26425 | 65 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1395 | Fis family transcriptional regulator | |||
| 1400 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoS1720ORF1400P |
| 1405 | DUF2556 domain-containing protein | |||
| 2055 | ribulose-phosphate 3-epimerase | |||
| 2060 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS1720DamP |
| 2065 | cell division protein DamX | |||
| 19280 | EamA family transporter | |||
| 19285 | V | V.SflFF59DcmP (100% identity) | V.EcoS1720DcmP | |
| 19290 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.EcoS1720DcmP |
| 19295 | phosphohydrolase | |||
| 22525 | PerC family transcriptional regulator | |||
| 22530 | M | M.EcoZ151ORF6750P (100% identity) | M.EcoS1720ORF22530P | |
| 22535 | DUF1382 family protein | |||
| 23035 | ribosome-associated inhibitor A | |||
| 23040 | M | M.SenYU39ORF1896P (100% identity) | M.EcoS1720ORF23040P | |
| 23045 | Com family DNA-binding transcriptional | |||
| 23605 | Shiga toxin Stx2 subunit A | |||
| 23625 | M | M.Ecocq9ORF19465P (100% identity) | M.EcoS1720ORF23625P | |
| 23630 | TrmB family transcriptional regulator | |||
| plasmid p1720-1 | ||||
| 27680 | glutamine--tRNA ligase | |||
| 27685 | M | M.Sen4474ORF24135P (100% identity) | M.EcoS1720ORF27685P | |
| 27690 | 226 aa hypothetical protein | |||
| ??? | M | M.Eco1713ORFAP (100% identity) | M.EcoS1720ORFAP | |
| plasmid p1720-2 | ||||
| 28020 | 73 aa hypothetical protein | |||
| 28025 | M | M.StyR64ORFAP (100% identity) | M.EcoS1720ORF28010P | |
| 28030 | DUF1281 domain-containing protein | |||
| 28020 | 73 aa hypothetical protein | |||
| 28025 | M | M.StyR64ORFAP (100% identity) | M.EcoS1720ORFCP | |
| 28030 | DUF1281 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8115 | R | Ssp28760McrCP (100% identity) | EcoS1720McrCP | |
| 8120 | R | Ssp28760McrBP (100% identity) | EcoS1720McrBP | |
| 8125 | endoribonuclease SymE | |||
| 8140 | type I restriction-modification system | |||
| 8145 | R | Ssp28760MrrP (100% identity) | EcoS1720MrrP | |
| 8150 | GTPase | |||