Escherichia coli S17-13 |
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Putative Escherichia coli S17-13 RM systems
Ref: Liu,J. et al. unpublished
REBASE ref # 25405
| Sequence length: | GenBank #: | |
| Chromosome: | 5,167,254 bp | CP024997 |
| plasmid p1713-1: | 141,331 bp | CP031766 |
| plasmid p1713-2: | 101,638 bp | CP031767 |
REBASE acronym: Eco1713
Org_num: 26668
All begin CWB37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1640 | endoribonuclease SymE | |||
| 1645 | S | S.EcosBORF22035P (100% identity) | TGANNNNNNNNTGCT | S.Eco1713ORF1650P |
| 1650 | M | M.Ecocq9ORF4140P (100% identity) | TGANNNNNNNNTGCT | M.Eco1713ORF1650P |
| 1655 | R | Ssp28760ORF3465P (100% identity) | TGANNNNNNNNTGCT | Eco1713ORF1650P |
| 1660 | restriction endonuclease | |||
| 6555 | M48 family peptidase | |||
| 6560 | R | EcoS1720ORF13060P (100% identity) | Eco1713ORF6580P | |
| 6565 | Appr-1-p processing protein | |||
| 6570 | DUF4433 domain-containing protein | |||
| 6575 | S | S1.EcoUM1886ORF17525P (99% identity) | S.Eco1713ORF6580P | |
| 6580 | M | M.EcoW14588ORF21505P (100% identity) | M.Eco1713ORF6580P | |
| 6585 | 64 aa hypothetical protein | |||
| 17555 | IS21 family transposase | |||
| ??? | M | M.EcoS1720ORFBP (100% identity) | M.Eco1713ORF17560P | |
| 17570 | IS3 family transposase | |||
| 17580 | ABC transporter | |||
| 17585 | R | Kpnb12LORF3425P (100% identity) | Eco1713ORF17595P | |
| 17590 | S | S.Kpnb12LORF3425P (100% identity) | S.Eco1713ORF17595P | |
| 17595 | M | M.Kpnb12LORF3425P (100% identity) | M.Eco1713ORF17595P | |
| 17600 | GTPase family protein | |||
| 19715 | 293 aa hypothetical protein | |||
| 19720 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Eco1713ORF19725P |
| 19725 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Eco1713ORF19725P |
| 19730 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Eco1713ORF19725P |
| 19735 | 65 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12795 | EamA family transporter | |||
| 12800 | V | V.SflFF59DcmP (100% identity) | V.Eco1713DcmP | |
| 12805 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco1713DcmP |
| 12810 | phosphohydrolase | |||
| 15990 | PerC family transcriptional regulator | |||
| 15995 | M | M.EcoZ151ORF6750P (100% identity) | M.Eco1713ORF15995P | |
| 16000 | DUF1382 family protein | |||
| 16500 | ribosome-associated inhibitor A | |||
| 16505 | M | M.SenYU39ORF1896P (100% identity) | M.Eco1713ORF16505P | |
| 16510 | Com family DNA-binding transcriptional | |||
| 17070 | Shiga toxin Stx2 subunit A | |||
| 17090 | M | M.Ecocq9ORF19465P (100% identity) | M.Eco1713ORF17090P | |
| 17095 | TrmB family transcriptional regulator | |||
| 21715 | Fis family transcriptional regulator | |||
| 21720 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco1713ORF21720P |
| 21725 | DUF2556 domain-containing protein | |||
| 22375 | ribulose-phosphate 3-epimerase | |||
| 22380 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1713DamP |
| 22385 | cell division protein DamX | |||
| plasmid p1713-1 | ||||
| 27370 | 73 aa hypothetical protein | |||
| 27375 | M | M.Ecocq9ORF29710P (100% identity) | M.Eco1713ORFBP | |
| 27380 | DUF1281 domain-containing protein | |||
| plasmid p1713-2 | ||||
| 28350 | recombination-associated protein RdgC | |||
| ??? | M | M.EcoS1720ORFAP (100% identity) | M.Eco1713ORFAP | |
| 28365 | glutamine--tRNA ligase | |||
| 28355 | 226 aa hypothetical protein | |||
| 28360 | M | M.Sen4474ORF24135P (100% identity) | M.Eco1713ORF28360P | |
| 28365 | glutamine--tRNA ligase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1630 | R | Ssp28760McrCP (100% identity) | Eco1713McrCP | |
| 1635 | R | Ssp28760McrBP (100% identity) | Eco1713McrBP | |
| 1640 | endoribonuclease SymE | |||
| 1655 | type I restriction-modification system | |||
| 1660 | R | Ssp28760MrrP (100% identity) | Eco1713MrrP | |
| 1665 | GTPase | |||