Prevotella intermedia KCOM 2836 |
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Putative Prevotella intermedia KCOM 2836 RM systems
Ref: Kook,J.-K. et al. unpublished
REBASE ref # 24621
Complete sequence: 2,760,702 bp
GenBank #: CP024697
REBASE acronym: Pin2836
Org_num: 26582
All begin CTM61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10685 | zinc-dependent metalloprotease | |||
| 10690 | R | Pin2698ORF10290P (99% identity) | Pin2836ORF10700P | |
| 10695 | S | S.Pin1945II (63% identity) | S.Pin2836ORF10700P | |
| 10700 | M | M.Pin1653I (99% identity) | M.Pin2836ORF10700P | |
| 10705 | nicotinamidase | |||
| 11285 | 102 aa hypothetical protein | |||
| 11290 | M | M.Pgi49417ORF7780P (95% identity) | M.Pin2836ORF11290P | |
| 11295 | S | S.PjeF0106VII (59% identity) | S.Pin2836ORF11290P | |
| 11300 | anticodon nuclease | |||
| 11305 | R | Tfo2417ORF3825P (98% identity) | Pin2836ORF11290P | |
| 11310 | cell filamentation protein Fic | |||
| 11580 | helicase | |||
| 11585 | C | C.PinWW414ORF5835P (100% identity) | C.Pin2836ORF11600P | |
| 11590 | R | Pin2698ORF9425P (100% identity) | Pin2836ORF11600P | |
| 11595 | DUF262 domain-containing protein | |||
| 11600 | M | M.Pin2698ORF9425P (99% identity) | M.Pin2836ORF11600P | |
| 11605 | cell filamentation protein Fic | |||
| 11610 | S | S4.Pin1741ORF12020P (88% identity) | S1.Pin2836ORF11600P | |
| 11615 | S | S2.Pin2698ORF9425P (93% identity) | S2.Pin2836ORF11600P | |
| 11620 | S | S4.Pin2698ORF9425P (51% identity) | S3.Pin2836ORF11600P | |
| ??? | S | S1.Bov258ORF13515P (67% identity) | S4.Pin2836ORF11600P | |
| 11630 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3485 | XRE family transcriptional regulator | |||
| 3490 | M | M.Pin2698I (100% identity) | CTSAG | M.Pin2836I |
| 3495 | SAM-dependent DNA methyltransferase | |||
| 3490 | site-specific DNA-methyltransferase | |||
| 3495 | RM | Pin2698ORF6210P (100% identity) | Pin2836ORF3495P | |
| 3500 | ABC transporter ATP-binding protein | |||
| 4185 | polyketide cyclase | |||
| 4190 | M | M.Pin2698ORF5585P (99% identity) | M.Pin2836ORF4190P | |
| 4195 | R | Pin2698ORF5585P (100% identity) | Pin2836ORF4190P | |
| 4200 | 69 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2545 | 1143 aa hypothetical protein | |||
| 2550 | M | M.Pin2698ORF7160P (100% identity) | M.Pin2836ORF2550P | |
| 2555 | R | Pin2698ORF7160P (100% identity) | Pin2836ORF2550P | |
| 2560 | cell filamentation protein Fic | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10225 | polyketide cyclase | |||
| 10230 | R | Pni103McrCP (97% identity) | Pin2836McrCP | |
| 10235 | R | Pin2033McrBP (97% identity) | Pin2836McrBP | |
| 10240 | polyketide cyclase | |||