Escherichia coli |
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Putative Escherichia coli RM systems
Ref: Tan,C. unpublished
REBASE ref # 22600
| Sequence length: | GenBank #: | |
| Chromosome: | 5,196,957 bp | CP024720 |
| plasmid p1NQ3: | 111,776 bp | CP024721 |
REBASE acronym: EcoNQ3
Org_num: 26589
All begin CUB98_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21180 | 699 aa hypothetical protein | |||
| 21185 | M | M.EcoZ247ORF19790P (100% identity) | M.EcoNQ3ORF21185P | |
| 21190 | S | S.EcoZ247ORF19790P (100% identity) | S.EcoNQ3ORF21185P | |
| 21195 | R | EcoLS4ORF9610P (100% identity) | EcoNQ3ORF21185P | |
| 21200 | 237 aa hypothetical protein | |||
| 21560 | toll/interleukin-1 receptor domain-containing | |||
| 21565 | M | M.EcoW004ORF18655P (100% identity) | M.EcoNQ3ORF21565P | |
| 21570 | S | S.EcoW004ORF18655P (100% identity) | S.EcoNQ3ORF21565P | |
| 21575 | DUF4268 domain-containing protein | |||
| 21580 | R | EcoW004ORF18655P (100% identity) | EcoNQ3ORF21565P | |
| 21585 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 335 | DUF2556 domain-containing protein | |||
| 340 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoNQ3ORF340P |
| 345 | Fis family transcriptional regulator | |||
| 4330 | 75 aa hypothetical protein | |||
| 4335 | M | M.EcoW113ORFIP (100% identity) | GATC | M.EcoNQ3ORF4335P |
| 4340 | endonuclease | |||
| 8115 | phosphohydrolase | |||
| 8120 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoNQ3DcmP |
| 8125 | V | V.SflC32DcmP (74% identity) | V.EcoNQ3DcmP | |
| 8130 | drug/metabolite exporter YedA | |||
| 11845 | 108 aa hypothetical protein | |||
| 11860 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoNQ3ORF11860P |
| 11865 | TrmB family transcriptional regulator | |||
| 14800 | XRE family transcriptional regulator | |||
| 14805 | M | M.KpnYN1ORFGP (89% identity) | M.EcoNQ3ORF14805P | |
| 14810 | 71 aa hypothetical protein | |||
| 18995 | zinc ribbon domain-containing protein | |||
| 19000 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.EcoNQ3ORF19000P |
| 19005 | integrase | |||
| 20875 | lysis protein S | |||
| 20880 | M | M.Ecos142ORF20090P (100% identity) | M.EcoNQ3ORF20880P | |
| 20885 | 67 aa hypothetical protein | |||
| 20915 | LexA family transcriptional regulator | |||
| 20920 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoNQ3ORF20920P |
| 20925 | PerC family transcriptional regulator | |||
| 26690 | cell division protein DamX | |||
| 26695 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNQ3DamP |
| 26700 | ribulose-phosphate 3-epimerase | |||
| plasmid p1NQ3 | ||||
| 27620 | 73 aa hypothetical protein | |||
| 27625 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoNQ3ORF27625P |
| 27630 | 103 aa hypothetical protein | |||