Salmonella enterica subsp. enterica serovar Typhimurium BL10 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium BL10 RM systems
Ref: Hong,Y.P. et al. unpublished
REBASE ref # 25361
| Sequence length: | GenBank #: | |
| Chromosome: | 4,835,517 bp | CP024619 |
| plasmid p113k: | 112,565 bp | CP025339 |
| plasmid p220k: | 220,023 bp | CP025340 |
REBASE acronym: SenBL10
Org_num: 26561
All begin CTI29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21025 | restriction endonuclease | |||
| 21030 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenBL10ORF21035P |
| 21035 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenBL10ORF21035P |
| 21040 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenBL10ORF21035P |
| 21045 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1845 | SPOR domain-containing protein | |||
| 1850 | M | M.StyTDamP (100% identity) | GATC | M.SenBL10DamP |
| 1855 | ribulose-phosphate 3-epimerase | |||
| 2355 | DUF2556 domain-containing protein | |||
| 2360 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenBL10ORF2360P |
| 2365 | Fis family transcriptional regulator | |||
| 5915 | TraR/DksA family transcriptional regulator | |||
| 5920 | M | M.Ssp15303ORFCP (88% identity) | M.SenBL10ORF5920P | |
| 5925 | replication endonuclease | |||
| 9355 | DUF4060 family protein | |||
| 9360 | M | M.Ssp15303ORFFP (100% identity) | GATC | M.SenBL10ORF9360P |
| 9365 | exonuclease | |||
| 10105 | phosphohydrolase | |||
| 10110 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenBL10DcmP |
| 10115 | V | V.Ssp15303Dcm2P (100% identity) | V.SenBL10DcmP | |
| 10120 | drug/metabolite exporter YedA | |||
| 21215 | BREX system P-loop protein BrxC | |||
| 21220 | RM | StyUK1IV (100% identity) | GATCAG | SenBL10ORF21220P |
| 21225 | ATP-binding protein | |||
| plasmid p113k | ||||
| 25655 | 73 aa hypothetical protein | |||
| 25660 | M | M.SspPIBORF23080P (100% identity) | M.SenBL10ORFBP | |
| 25665 | 0 aa hypothetical protein | |||
| plasmid p220k | ||||
| 25905 | DNA-binding protein | |||
| 25910 | M | M.Sen5474ORF25880P (100% identity) | M.SenBL10ORFDP | |
| 25915 | 284 aa hypothetical protein | |||
| 26640 | DUF1173 family protein | |||
| 26645 | M | M.YpsF1ORFCP (100% identity) | M.SenBL10ORFAP | |
| 26650 | thermonuclease family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18755 | 33 aa hypothetical protein | |||
| 18760 | R | Ssp15303ORFGP (99% identity) | CAGAG | SenBL10ORF18765P |
| 18765 | M | M.Ssp15303ORFGP (100% identity) | CAGAG | M.SenBL10ORF18765P |
| 18770 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21020 | BrnT family toxin | |||
| 21025 | R | StyUK1MrrP (100% identity) | SenBL10MrrP | |
| 21030 | type I restriction-modification system | |||