Xanthomonas citri pv. phaseoli var. fuscans CFBP6975 |
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Putative Xanthomonas citri pv. phaseoli var. fuscans CFBP6975 RM systems
Ref: Ruh,M. et al. BMC Genomics 18 (1), 670 (2017)
REBASE ref # 25348
| Sequence length: | GenBank #: | |
| Chromosome: | 5,084,371 bp | CP021006 |
| plasmid pC: | 38,867 bp | CP021007 |
REBASE acronym: Xci6975
Org_num: 26531
All begin XcfCFBP6975P_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5010 | 88 aa hypothetical protein | |||
| 5015 | R | XfuRORFAP (100% identity) | Xci6975ORF5065P | |
| 5020 | IS256-like element ISXax1 family transposase | |||
| 5025 | 215 aa hypothetical protein | |||
| 5030 | abortive infection family protein | |||
| 5035 | S | S2.XfuC5ORF5750P (84% identity) | S1.Xci6975ORF5065P | |
| 5040 | IS256-like element ISXax1 family transposase | |||
| 24055 | S | S.Xca33086ORF18150P (23% identity) | S2.Xci6975ORF5065P | |
| 5045 | IS5-like element ISXfu2 family transposase | |||
| ??? | S | S1.Xfu49ORF1227P (41% identity) | S3.Xci6975ORF5065P | |
| 5060 | nucleotidyltransferase substrate binding | |||
| 5065 | M | M.XfuC5ORF5750P (99% identity) | M2.Xci6975ORF5065P | |
| 5070 | IS256-like element ISXax1 family transposase | |||
| ??? | M | M.Xci6166ORF13270P (100% identity) | M1.Xci6975ORF5065P | |
| 5080 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19930 | 86 aa hypothetical protein | |||
| 19935 | R | R2.XciPR8FORF14235P (100% identity) | R1.Xci6975ORF19945P | |
| 19940 | R | Xfu49ORF2810P (100% identity) | R2.Xci6975ORF19945P | |
| 19945 | M | M.XfuRORFBP (98% identity) | M.Xci6975ORF19945P | |
| 19950 | V | V.XfuRORFBP (100% identity) | V.Xci6975ORF19945P | |
| 19955 | AbrB/MazE/SpoVT family DNA-binding | |||
| 24105 | 445 aa hypothetical protein | |||
| 6720 | M | M.XcaCORF2967P (93% identity) | M.Xci6975ORF6720P | |
| 6730 | phage portal protein | |||
| plasmid pC | ||||
| 22840 | recombinase family protein | |||
| 22830 | M | M.Xsp98C4ORF22795P (100% identity) | CCCGGG | M.Xci6975ORF23080P |
| 22825 | R | Xsp98C4ORF22795P (100% identity) | CCCGGG | Xci6975ORF23080P |
| 22820 | 95 aa hypothetical protein | |||
| 22820 | 68 aa hypothetical protein | |||
| 22825 | R | Xsp98C4ORF22795P (100% identity) | CCCGGG | Xci6975ORF22830P |
| ??? | M | M.Xph6982ORF23100P (100% identity) | CCCGGG | M.Xci6975ORF22830P |
| 22835 | recombinase | |||
| 23040 | 68 aa hypothetical protein | |||
| 23045 | R | Xsp98C4ORF22795P (100% identity) | CCCGGG | Xci6975ORF23050P |
| 23050 | M | M.Xph49119ORF23545P (99% identity) | CCCGGG | M.Xci6975ORF23050P |
| 23055 | resolvase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24065 | 78 aa hypothetical protein | |||
| 5075 | R | Xfu49MrrP (100% identity) | Xci6975Mrr2P | |
| 5080 | type II toxin-antitoxin system RelE/ParE family | |||