Paracoccus yeei TT13 |
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Putative Paracoccus yeei TT13 RM systems
Ref: Lee,K. et al. unpublished
REBASE ref # 18189
Complete sequence: 3,588,087 bp
GenBank #: CP024422
REBASE acronym: PyeTT13
Org_num: 26474
All begin PYTT13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12300 | integrase | |||
| 12305 | R | restriction endonuclease | PyeTT13ORF12325AP | |
| 12310 | IS256 family transposase | |||
| 12315 | R | 377 aa hypothetical protein | PyeTT13ORF12325BP | |
| 12320 | 240 aa hypothetical protein | |||
| 12325 | M | M.Pye32053ORF1275P (99% identity) | M.PyeTT13ORF12325P | |
| 12330 | S | S.Pye32053ORF1275P (47% identity) | S.PyeTT13ORF12325P | |
| 12335 | 178 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2600 | GSCFA family protein | |||
| 2605 | M | M.Pye32053ORF2611P (100% identity) | M.PyeTT13ORF2605P | |
| 2610 | ribonuclease HII | |||
| 3835 | AAA family ATPase | |||
| 3845 | V | V.Pph9175ORF18200P (84% identity) | V.PyeTT13ORF3850P | |
| 3850 | M | M.Pko0001ORF8120P (85% identity) | M.PyeTT13ORF3850P | |
| 3855 | 242 aa hypothetical protein | |||
| 3950 | HNH endonuclease | |||
| 3955 | M | M.Pko0001ORF8220P (92% identity) | M.PyeTT13ORF3955P | |
| 3960 | 72 aa hypothetical protein | |||
| 10365 | 92 aa hypothetical protein | |||
| 10370 | M | M.Ppa10489ORF17270P (76% identity) | M.PyeTT13ORF10370P | |
| 10375 | 104 aa hypothetical protein | |||
| 10380 | 194 aa hypothetical protein | |||
| 10385 | M | M2.Ppa2944ORF3635P (91% identity) | M.PyeTT13ORF10385P | |
| 10390 | 218 aa hypothetical protein | |||
| 12260 | 234 aa hypothetical protein | |||
| ??? | M | M.Pye32053ORF1265P (100% identity) | M.PyeTT13ORF12265P | |
| 12275 | RNA polymerase subunit sigma | |||
| 12560 | 102 aa hypothetical protein | |||
| 12565 | M | M.Rtr3060ORFAP (75% identity) | M.PyeTT13ORF12565P | |
| 12570 | 208 aa hypothetical protein | |||
| 13090 | 128 aa hypothetical protein | |||
| 13095 | M | M.Pye20ORF13640P (86% identity) | M.PyeTT13ORF13095P | |
| 13100 | 105 aa hypothetical protein | |||
| 13405 | DNA cytosine methyltransferase | |||
| 13410 | M | M.Pye20ORF9005P (100% identity) | M.PyeTT13ORF13410P | |
| 13415 | 144 aa hypothetical protein | |||
| 13525 | 136 aa hypothetical protein | |||
| 13530 | M | M.PcoRK1IV (80% identity) | M.PyeTT13ORF13530P | |
| 13535 | R | PcoRK1IVP (90% identity) | PyeTT13ORF13530P | |
| 13540 | 111 aa hypothetical protein | |||
| 13720 | 77 aa hypothetical protein | |||
| 13725 | M | M.RbaD4M1ORF300P (86% identity) | M.PyeTT13ORF13725P | |
| 13730 | DNA methylase | |||
| 13725 | DNA methyltransferase | |||
| 13730 | M | M.Rca37b4ORF18230P (96% identity) | M.PyeTT13ORF13730P | |
| 13735 | RNA polymerase subunit sigma | |||
| 15230 | NgoFVII family restriction endonuclease | |||
| 15235 | RM | RboNS23ORF24400P (95% identity) | PyeTT13ORF15235P | |
| 15240 | 709 aa hypothetical protein | |||
| 15235 | 1088 aa hypothetical protein | |||
| 15240 | M | M2.RleTpKORF2940P (76% identity) | M1.PyeTT13ORF15240P | |
| 15245 | M | M1.RboNS23ORF24400P (94% identity) | M2.PyeTT13ORF15240P | |
| 15250 | 72 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13840 | 62 aa hypothetical protein | |||
| 13845 | R | CsaHT4ORFKP (90% identity) | PyeTT13ORF13850P | |
| 13850 | M | M.RspA2ORFSP (83% identity) | M.PyeTT13ORF13850P | |
| 13855 | type II toxin-antitoxin system | |||