Escherichia coli UFU_EC98 |
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Putative Escherichia coli UFU_EC98 RM systems
Ref: Pereira,U.P. et al. unpublished
REBASE ref # 25325
| Sequence length: | GenBank #: | |
| Chromosome: | 4,849,850 bp | CP024092 |
| plasmid pEc98_1: | 88,230 bp | CP024093 |
REBASE acronym: EcoEC98
Org_num: 26453
All begin CQ842_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8610 | 128 aa hypothetical protein | |||
| 8615 | M | M.EcosC41ORF5210P (100% identity) | M.EcoEC98ORF8615P | |
| 8620 | S | S.EcosC41ORF5210P (98% identity) | S.EcoEC98ORF8615P | |
| 8625 | 428 aa hypothetical protein | |||
| 21325 | 540 aa hypothetical protein | |||
| ??? | S | S.EcosC41ORF22705P (100% identity) | S.EcoEC98ORF21335P | |
| 21335 | M | M.EcoMB57ORF19930P (100% identity) | M.EcoEC98ORF21335P | |
| 21340 | R | EcoMB57ORF19930P (100% identity) | EcoEC98ORF21335P | |
| 21345 | ISL3 family transposase | |||
| 21465 | autotransporter adhesin Ag43 | |||
| 21470 | M | M.EcoPI24ORF3560P (100% identity) | M.EcoEC98ORF21470P | |
| 21475 | 50S ribosome-binding GTPase | |||
| 23955 | M48 family peptidase | |||
| 23960 | R | EcoC1164ORF9075P (100% identity) | EcoEC98ORF23975P | |
| 23965 | YecA family protein | |||
| 23970 | S | S.EcoA68ORF15285P (100% identity) | S.EcoEC98ORF23975P | |
| 23975 | M | M.EcoLR45ORF23990P (100% identity) | M.EcoEC98ORF23975P | |
| 23980 | 410 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8740 | osmoprotectant transport activator ProQ | |||
| 8745 | M | M.SflFF24DndBP (100% identity) | M.EcoEC98DndBP | |
| 8750 | DNA phosphorothioation system sulfurtransferase | |||
| 8745 | DNA sulfur modification protein DndB | |||
| 8750 | M | M.SflFF24DndCP (100% identity) | M.EcoEC98DndCP | |
| ??? | Sulphur transferase DndC, putative | |||
| 8750 | DNA phosphorothioation system sulfurtransferase | |||
| ??? | M | M.Eco55989DndDP (100% identity) | M.EcoEC98DndDP | |
| 8760 | DUF1832 domain-containing protein | |||
| ??? | Sulphur transferase DndC, putative | |||
| 8760 | M | M.SflFF24DndEP (100% identity) | M.EcoEC98DndEP | |
| 8765 | DGQHR domain-containing protein | |||
| 8775 | 113 aa hypothetical protein | |||
| ??? | R | EcoKG8DptHP (100% identity) | EcoEC98DptHP | |
| 8785 | DNA phosphorothioation-dependent restriction | |||
| ??? | dnd system-associated protein 2 | |||
| 8785 | R | SflFF24DptGP (100% identity) | EcoEC98DptGP | |
| 8790 | DNA phosphorothioation-dependent restriction | |||
| 8785 | DNA phosphorothioation-dependent restriction | |||
| 8790 | R | SflFF24DptFP (100% identity) | EcoEC98DptFP | |
| 8795 | integrase | |||
| 14020 | cell division protein DamX | |||
| 14025 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoEC98DamP |
| 14030 | ribulose-phosphate 3-epimerase | |||
| 14610 | transporter | |||
| 14615 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoEC98ORF14615P |
| 14620 | Fis family transcriptional regulator | |||
| 24315 | EamA family transporter | |||
| 24320 | V | V.Eco3DcmP (99% identity) | V.EcoEC98DcmP | |
| 24325 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.EcoEC98DcmP |
| 24330 | phosphohydrolase | |||
| plasmid pEc98_1 | ||||
| 24730 | 101 aa hypothetical protein | |||
| 24735 | M | M.SenBR027ORFEP (100% identity) | SAY | M.EcoEC98ORF24735P |
| 24740 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8595 | HNH endonuclease | |||
| 8600 | R | SflN101McrBP (100% identity) | EcoEC98McrBP | |
| 8605 | R | Ecows53McrCP (100% identity) | EcoEC98McrCP | |
| 8610 | 128 aa hypothetical protein | |||