Escherichia coli O127:H6 |
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Putative Escherichia coli O127:H6 RM systems
Ref: Fernandez ANGEL,L. unpublished
REBASE ref # 25324
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,792,490 bp | LT903847 |
| chromosome 1: | 4,848,621 bp | LT827011 |
REBASE acronym: Eco234869
Org_num: 26451
All begin BQ9544_, BQ9550_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4611 | 277 aa hypothetical protein | |||
| 4610 | M | M.EcoS6995ORFEP (100% identity) | M.EcoEPEC1ORF4610P | |
| 4609 | S | S.EcoO127ORF4610P (100% identity) | S.EcoEPEC1ORF4610P | |
| 4608 | R | EcoS6995ORFEP (100% identity) | EcoEPEC1ORF4610P | |
| 4607 | integrase | |||
| 1096 | 79 aa hypothetical protein | |||
| 1095 | M | M.EcoO127I (100% identity) | M.EcoEPEC1ORF1095P | |
| 1094 | S | S.EcoO127I (100% identity) | S.EcoEPEC1ORF1095P | |
| 1093 | 218 aa hypothetical protein | |||
| 1092 | 359 aa hypothetical protein | |||
| 1091 | R | EcoO127I (100% identity) | EcoEPEC1ORF1095P | |
| 1090 | 238 aa hypothetical protein | |||
| chromosome 1 | ||||
| 1090 | 238 aa hypothetical protein | |||
| 1091 | R | EcoO127I (100% identity) | Eco234869ORF1095P | |
| 1092 | 359 aa hypothetical protein | |||
| 1093 | 218 aa hypothetical protein | |||
| 1094 | S | S.EcoO127I (100% identity) | S.Eco234869ORF1095P | |
| 1095 | M | M.EcoO127I (100% identity) | M.Eco234869ORF1095P | |
| 1096 | 79 aa hypothetical protein | |||
| 4607 | integrase | |||
| 4608 | R | EcoS6995ORFEP (100% identity) | Eco234869ORF4610P | |
| 4609 | S | S.EcoO127ORF4610P (100% identity) | S.Eco234869ORF4610P | |
| 4610 | M | M.EcoS6995ORFEP (100% identity) | M.Eco234869ORF4610P | |
| 4611 | 277 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3632 | 428 aa hypothetical protein | |||
| 3631 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoEPEC1DamP |
| 3630 | ribulose-phosphate 3-epimerase | |||
| 3533 | membrane protein | |||
| 3532 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.EcoEPEC1ORF3532P |
| 3531 | DNA-binding protein Fis | |||
| 2781 | integrase | |||
| 2780 | M | M.EcoO127ORF2780P (100% identity) | M.EcoEPEC1ORF2780P | |
| 2779 | 237 aa hypothetical protein | |||
| 2658 | 546 aa hypothetical protein | |||
| 2657 | M | M.EcoO127ORF2657P (100% identity) | M.EcoEPEC1ORF2657P | |
| 2656 | DNA-binding protein | |||
| 2528 | protein NinB | |||
| 2527 | M | M.EcoO127ORF2527P (100% identity) | GATC | M.EcoEPEC1ORF2527P |
| 2526 | protein NinE | |||
| 2075 | 231 aa hypothetical protein | |||
| 2074 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.EcoEPEC1DcmP |
| 2073 | V | V.EcoSC477DcmP (100% identity) | V.EcoEPEC1DcmP | |
| 2072 | 306 aa hypothetical protein | |||
| 809 | replication protein | |||
| 808 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.EcoEPEC1ORF808P |
| 807 | TraR/DksA family transcriptional regulator | |||
| chromosome 1 | ||||
| 807 | TraR/DksA family transcriptional regulator | |||
| 808 | M | M.EcoZ01ORF1668P (100% identity) | GATC | M.Eco234869ORF808P |
| 809 | replication protein | |||
| 1003 | protein NinB | |||
| 1004 | M | M.EcoSC477ORFCP (100% identity) | GATC | M.Eco234869ORF1004P |
| 1005 | protein NinE | |||
| 2072 | 306 aa hypothetical protein | |||
| 2073 | V | V.EcoSC477DcmP (100% identity) | V.Eco234869DcmP | |
| 2074 | M | M.EcoSC477DcmP (100% identity) | CCWGG | M.Eco234869DcmP |
| 2075 | 231 aa hypothetical protein | |||
| 2526 | protein NinE | |||
| 2527 | M | M.EcoO127ORF2527P (100% identity) | GATC | M.Eco234869ORF2527P |
| 2528 | protein NinB | |||
| 2656 | DNA-binding protein | |||
| 2657 | M | M.EcoO127ORF2657P (100% identity) | M.Eco234869ORF2657P | |
| 2658 | 546 aa hypothetical protein | |||
| 2779 | 237 aa hypothetical protein | |||
| 2780 | M | M.EcoO127ORF2780P (100% identity) | M.Eco234869ORF2780P | |
| 2781 | integrase | |||
| 3531 | DNA-binding protein Fis | |||
| 3532 | M | M.EcoS6995ORFBP (100% identity) | ATGCAT | M.Eco234869ORF3532P |
| 3533 | membrane protein | |||
| 3630 | ribulose-phosphate 3-epimerase | |||
| 3631 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco234869DamP |
| 3632 | 428 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4614 | restriction endonuclease | |||
| 4613 | R | EcoS6995McrCP (100% identity) | EcoEPEC1McrCP | |
| 4612 | R | EcoS6995McrBP (100% identity) | EcoEPEC1McrBP | |
| 4611 | 277 aa hypothetical protein | |||
| chromosome 1 | ||||
| 4611 | 277 aa hypothetical protein | |||
| 4612 | R | EcoS6995McrBP (100% identity) | Eco234869McrBP | |
| 4613 | R | EcoS6995McrCP (100% identity) | Eco234869McrCP | |
| 4614 | restriction endonuclease | |||