Dickeya dianthicola RNS04.9 |
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Putative Dickeya dianthicola RNS04.9 RM systems
Ref: Raoul des Essarts,Y. et al. Genome Announc 3 (3), e00581-15 (2015)
REBASE ref # 26160
Complete sequence: 4,720,132 bp
GenBank #: CP017638
REBASE acronym: Ddi49
Org_num: 16123
All begin DDI_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 476 | 153 aa hypothetical protein | |||
| 477 | S | S.Ddi453ORFAP (100% identity) | S.Ddi49ORF478P | |
| 478 | M | M.Ddi453ORFAP (100% identity) | M.Ddi49ORF478P | |
| 479 | R | Ddi453ORFAP (100% identity) | Ddi49ORF478P | |
| 480 | Ribosomal-protein-S18p-alanin acetyltransferase | |||
| 713 | metal-dependent hydrolase | |||
| ??? | R | Ddi453ORFEP (100% identity) | Ddi49ORF718P | |
| 715 | ADP-ribose 1-phosphate phophatase relate | |||
| 716 | 218 aa hypothetical protein | |||
| 717 | S | S.DdiME23ORF921P (100% identity) | S.Ddi49ORF718P | |
| 718 | M | M.Ddi453ORFEP (100% identity) | M.Ddi49ORF718P | |
| 719 | 79 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 199 | Transporter, LysE family | |||
| 200 | V | V.DdiPA24ORF2190P (100% identity) | V.Ddi49ORF201P | |
| 201 | M | M.DdiME30ORF2190P (100% identity) | CCWGG | M.Ddi49ORF201P |
| 202 | R | Ddi980ORFCP (100% identity) | CCWGG | Ddi49ORF201P |
| 203 | transport protein | |||
| 394 | Phage protein | |||
| 395 | M | M1.Ddi453ORFBP (100% identity) | M1.Ddi49ORF395P | |
| 396 | M | M.Dsp2401ORFHP (100% identity) | M2.Ddi49ORF395P | |
| 397 | Phage protein | |||
| 398 | Replication gene A protein | |||
| 399 | M | M.Dsp2401ORFIP (100% identity) | M.Ddi49ORF399P | |
| 400 | 52 aa hypothetical protein | |||
| 3906 | Ribulose-phosphate 3-epimerase | |||
| 3907 | M | M.Dsp2401ORFJP (100% identity) | GATC | M.Ddi49DamP |
| 3908 | DamX, an inner membrane protein involved i bile | |||