Salmonella enterica subsp. enterica RM11065 |
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Putative Salmonella enterica subsp. enterica RM11065 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 25281
| Sequence length: | GenBank #: | |
| Chromosome: | 4,991,140 bp | CP022663 |
| plasmid pRM11065-1: | 143,770 bp | CP022661 |
REBASE acronym: Sen11065
Org_num: 26354
All begin CGA24_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27120 | 64 aa hypothetical protein | |||
| 27125 | S | S.SenSW70ORF19425P (99% identity) | CNGANNNNNNNNTGCG | S.Sen11065ORF27130P |
| 27130 | M | M.SenW714ORF20250P (98% identity) | CNGANNNNNNNNTGCG | M.Sen11065ORF27130P |
| 27135 | R | Sen5801IIIP (99% identity) | CNGANNNNNNNNTGCG | Sen11065ORF27130P |
| 27140 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7990 | PerC family transcriptional regulator | |||
| 7995 | M | M.Sen73555ORF13275P (99% identity) | M.Sen11065ORF7995P | |
| 8000 | RusA family crossover junction | |||
| 13125 | drug/metabolite exporter YedA | |||
| 13130 | V | V.Sen59889DcmP (100% identity) | V.Sen11065DcmP | |
| 13135 | M | M.Sen9424DcmP (99% identity) | CCWGG | M.Sen11065DcmP |
| 13140 | phosphohydrolase | |||
| 15835 | 79 aa hypothetical protein | |||
| 15840 | M | M.Sen39521ORF2240P (99% identity) | M.Sen11065ORF15840P | |
| 15845 | DUF4406 domain-containing protein | |||
| 15850 | 185 aa hypothetical protein | |||
| 15855 | M | M.Sen47351ORF15565P (98% identity) | M.Sen11065ORF15855P | |
| 15860 | replication protein | |||
| 20045 | endonuclease | |||
| 20050 | M | M.Kqu4101ORF3150P (96% identity) | M.Sen11065ORF20050P | |
| 20055 | 75 aa hypothetical protein | |||
| 21255 | integrase | |||
| 21260 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen11065ORF21260P |
| 21265 | DUF2556 domain-containing protein | |||
| 21775 | ribulose-phosphate 3-epimerase | |||
| 21780 | M | DNA adenine methylase | GATC | M.Sen11065DamP |
| 21785 | cell division protein DamX | |||
| plasmid pRM11065-1 | ||||
| 480 | 73 aa hypothetical protein | |||
| 485 | M | M.Sen1383ORF18410P (99% identity) | M.Sen11065ORF485P | |
| 490 | 67 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3170 | MFS transporter | |||
| 3175 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.Sen11065ORF3175P |
| 3180 | R | Sen5706IIP (99% identity) | CAGAG | Sen11065ORF3175P |
| 3185 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 27135 | type I restriction-modification system | |||
| 27140 | R | StyTMrrP (100% identity) | Sen11065MrrP | |
| 27145 | 95 aa hypothetical protein | |||