Escherichia coli 2011C-3665 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 2011C-3665 RM systems
Ref: Shridhar,P.B. et al. unpublished
REBASE ref # 24880
Contig set: 5,374,963 bp
GenBank #: NEKP00000000 (NZ_NEKP00000000)
REBASE acronym: Eco3665
Org_num: 25892
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 151 | Uncharacterized protein | |||
| 152 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco3665ORFNP |
| 154 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco3665ORFNP |
| 156 | M | M.EcoS40ORF24345P (100% identity) | RTCANNNNNNCTC | M.Eco3665ORFNP |
| 159 | Uncharacterized protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.Eco3665ORFKP (100% identity) | M.Eco3665ORFLP | |
| 5 | cytoplasmic protein | |||
| 1 | M | M.EcoSTEC636ORF9825P (100% identity) | M.Eco3665ORFJP | |
| 3 | 82 aa hypothetical protein | |||
| 6 | 116 aa hypothetical protein | |||
| 8 | M | M.EcoSTEC1014ORF14400P (99% identity) | M.Eco3665ORFIP | |
| 10 | Uncharacterized protein | |||
| 7 | cytoplasmic protein | |||
| 9 | M | M.Eco3665ORFLP (100% identity) | M.Eco3665ORFKP | |
| 8 | Uncharacterized protein | |||
| 11 | M | M.Eco685AORFGP (98% identity) | M.Eco3665ORFHP | |
| 15 | Uncharacterized protein | |||
| 20 | 95 aa hypothetical protein AU083_gp23 | |||
| 21 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco3665ORFFP |
| 23 | R | Sso1099IP (100% identity) | CTGCAG | Eco3665ORFFP |
| 24 | 87 aa hypothetical protein | |||
| 29 | Antirepressor | |||
| 35 | M | M.Eco15821ORFGP (92% identity) | M.Eco3665ORFOP | |
| 19 | NinB protein | |||
| 21 | M | M.EcoE62ORF21330P (99% identity) | M.Eco3665ORFEP | |
| 25 | Protein ninD | |||
| 26 | Bacteriophage replication protein A domain protein | |||
| 31 | M | M.Eco9085ORF3273P (100% identity) | GATC | M.Eco3665ORFDP |
| 33 | C4-type zinc finger protein, DksA/TraR family | |||
| 23 | periplasmic protein | |||
| 24 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco3665ORFCP |
| 26 | 98 aa hypothetical protein | |||
| 88 | HD domain protein | |||
| 89 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco3665DcmP |
| ??? | V | V.SflFF64DcmP (91% identity) | V.Eco3665DcmP | |
| 95 | Carboxylate/amino acid/amine transporter | |||
| 127 | Ribulose-phosphate 3-epimerase | |||
| 128 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3665DamP |
| 131 | Cell division protein DamX | |||
| 370 | Uncharacterized protein | |||
| 372 | M | M.Eco1313ORF5518P (100% identity) | SAY | M.Eco3665ORFBP |
| 376 | cytoplasmic protein | |||
| 528 | 131 aa hypothetical protein | |||
| 532 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco3665ORFAP |
| 536 | Regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17 | 67 aa hypothetical protein | |||
| 19 | R | Eco4404ORFIP (99% identity) | Eco3665ORFGP | |
| 23 | M | M.EcoSTEC1080ORF26050P (99% identity) | M.Eco3665ORFGP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | Uncharacterized protein | |||
| 3 | R | Eco61769McrBP (99% identity) | Eco3665McrBP | |
| 4 | R | EcoZ151McrCP (100% identity) | Eco3665McrCP | |
| 5 | Uncharacterized protein | |||