Escherichia coli 2013-6-140D |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 2013-6-140D RM systems
Ref: Shridhar,P.B. et al. unpublished
REBASE ref # 24880
Contig set: 5,198,448 bp
GenBank #: NEKM00000000 (NZ_NEKM00000000)
REBASE acronym: Eco140D
Org_num: 25888
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 183 | Uncharacterized protein | |||
| 185 | R | SflN107ORF19785P (100% identity) | Eco140DORFBP | |
| 188 | M | M.SflTORF4636P (100% identity) | M.Eco140DORFBP | |
| 192 | S | S.SflN107ORF19785P (100% identity) | S.Eco140DORFBP | |
| 195 | Endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8 | HD domain protein | |||
| 9 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco140DDcmP |
| 11 | V | V.Ecos2020DcmP (100% identity) | V.Eco140DDcmP | |
| 15 | Carboxylate/Amino Acid/Amine Transporter | |||
| 24 | periplasmic protein | |||
| 25 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco140DORFAP |
| 26 | 98 aa hypothetical protein | |||
| 112 | Ribulose-phosphate 3-epimerase | |||
| 113 | M | Site-specific DNA-methyltransferase | GATC | M.Eco140DDamP |
| 116 | Cell division protein DamX | |||
| 140 | Uncharacterized protein | |||
| 141 | M | M.YpsF1ORFCP (100% identity) | M.Eco140DORFCP | |
| 144 | Uncharacterized protein | |||
| 313 | 83 aa hypothetical protein | |||
| 314 | V | V.Eco21SOC08ORF19550P (100% identity) | V.Eco140DORFHP | |
| 316 | M | M.Eco4502ORFEP (100% identity) | M.Eco140DORFHP | |
| 317 | R | Eho1074ORF2870P (100% identity) | Eco140DORFHP | |
| 319 | Uncharacterized protein | |||
| 377 | Uncharacterized protein | |||
| 378 | M | M.YpsF1ORFDP (100% identity) | M.Eco140DORFIP | |
| 379 | DNA-binding protein | |||
| 430 | 238 aa hypothetical protein | |||
| 433 | M | M.YpsF1ORFBP (100% identity) | M.Eco140DORFEP | |
| 435 | Uncharacterized protein | |||
| 870 | Uncharacterized protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco140DORFFP | |
| 874 | 77 aa hypothetical protein | |||
| 1081 | NinF | |||
| 1084 | M | M.Eco173DORFJP (100% identity) | GATC | M.Eco140DORFGP |
| 1087 | NinB | |||