Escherichia coli 2013-6-173D |
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Putative Escherichia coli 2013-6-173D RM systems
Ref: Shridhar,P.B. et al. unpublished
REBASE ref # 24880
Contig set: 5,011,218 bp
GenBank #: NEKK00000000 (NZ_NEKK00000000)
REBASE acronym: Eco173D
Org_num: 25887
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 460 | Endoribonuclease SymE | |||
| 462 | S | S.SflN107ORF19785P (100% identity) | S.Eco173DORFBP | |
| 465 | M | M.SflTORF4636P (99% identity) | M.Eco173DORFBP | |
| 469 | R | SflN107ORF19785P (100% identity) | Eco173DORFBP | |
| 472 | Uncharacterized protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22 | periplasmic protein | |||
| 23 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco173DORFAP |
| 24 | 98 aa hypothetical protein | |||
| 139 | Uncharacterized protein | |||
| 140 | M | M.YpsF1ORFCP (100% identity) | M.Eco173DORFCP | |
| 143 | Uncharacterized protein | |||
| 130 | NinB | |||
| 133 | M | M.Eco140DORFGP (100% identity) | GATC | M.Eco173DORFJP |
| 137 | NinF | |||
| 221 | Uncharacterized protein | |||
| 223 | M | M.Eco81EVAORFBP (99% identity) | GATC | M.Eco173DORFIP |
| 228 | SOS-response repressor and protease LexA | |||
| 338 | Uncharacterized protein | |||
| 339 | R | Eho1074ORF2870P (100% identity) | Eco173DORFFP | |
| 341 | M | M.Eco4502ORFEP (100% identity) | M.Eco173DORFFP | |
| 342 | V | V.Eco21SOC08ORF19550P (100% identity) | V.Eco173DORFFP | |
| 344 | 83 aa hypothetical protein | |||
| 389 | Cell division protein DamX | |||
| 393 | M | Site-specific DNA-methyltransferase | GATC | M.Eco173DDamP |
| 395 | Ribulose-phosphate 3-epimerase | |||
| 378 | Uncharacterized protein | |||
| 379 | M | M.YpsF1ORFDP (100% identity) | M.Eco173DORFGP | |
| 380 | DNA-binding protein | |||
| 430 | 238 aa hypothetical protein | |||
| 433 | M | M.YpsF1ORFBP (100% identity) | M.Eco173DORFEP | |
| 435 | Uncharacterized protein | |||
| 1237 | Carboxylate/Amino Acid/Amine Transporter | |||
| 1238 | V | V.Ecos2020DcmP (100% identity) | V.Eco173DDcmP | |
| 1242 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco173DDcmP |
| 1244 | HD domain protein | |||