Escherichia coli 2013-6-685A |
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Putative Escherichia coli 2013-6-685A RM systems
Ref: Shridhar,P.B. et al. unpublished
REBASE ref # 24880
Contig set: 5,219,028 bp
GenBank #: NEKE00000000 (NZ_NEKE00000000)
REBASE acronym: Eco685A
Org_num: 25882
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | Uncharacterized protein | |||
| 4 | M | M.EcoS40ORF24345P (100% identity) | RTCANNNNNNCTC | M.Eco685AORFKP |
| 7 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco685AORFKP |
| 8 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco685AORFKP |
| 10 | Uncharacterized protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | DNA replication helicase | M.Eco685AORFIP | |
| 5 | 64 aa hypothetical protein | |||
| 2 | 101 aa hypothetical protein | |||
| 3 | M | M.EcoZ1836ORF13250P (44% identity) | M.Eco685AORFHP | |
| 1 | M | M.Eco148BORFGP (100% identity) | M.Eco685AORFLP | |
| 3 | 101 aa hypothetical protein | |||
| 2 | 64 aa hypothetical protein | |||
| 3 | M | Methyltransferase | M.Eco685AORFFP | |
| 6 | Uncharacterized protein | |||
| 9 | M | M.Eco3665ORFHP (98% identity) | M.Eco685AORFGP | |
| 7 | LexA DNA binding domain protein | |||
| 10 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco685AORFEP |
| 13 | Uncharacterized protein YfdN | |||
| 20 | 95 aa hypothetical protein AU083_gp23 | |||
| 21 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco685AORFCP |
| 23 | R | Sso1099IP (100% identity) | CTGCAG | Eco685AORFCP |
| 24 | 87 aa hypothetical protein | |||
| 69 | Regulator | |||
| 72 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco685AORFDP |
| 77 | 128 aa hypothetical protein | |||
| 79 | Phage/conjugal plasmid C-4 type zinc finger protein, TraR family | |||
| 81 | M | M.Eco148BORFBP (100% identity) | GATC | M.Eco685AORFAP |
| 82 | replication endonuclease from retron EC67 | |||
| 130 | Carboxylate/amino acid/amine transporter | |||
| 131 | V | V.Ecos2020DcmP (100% identity) | V.Eco685ADcmP | |
| 135 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco685ADcmP |
| 137 | HD domain protein | |||
| 137 | NinB protein | |||
| 139 | M | M.Eco64EVAORFAP (100% identity) | M.Eco685AORFJP | |
| 144 | 66 aa hypothetical protein | |||
| 270 | 98 aa hypothetical protein | |||
| 272 | M | M.Eco148BORFAP (100% identity) | ATGCAT | M.Eco685AORFBP |
| 273 | periplasmic protein | |||
| 348 | Cell division protein DamX | |||
| 351 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco685ADamP |
| 353 | Ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | 83 aa hypothetical protein | |||
| 2 | R | SflSTLE4McrBP (100% identity) | Eco685AMcrBP | |
| 3 | R | EcoZ151McrCP (100% identity) | Eco685AMcrCP | |
| 4 | Uncharacterized protein | |||