Escherichia coli 2013-6-148B |
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Putative Escherichia coli 2013-6-148B RM systems
Ref: Shridhar,P.B. et al. unpublished
REBASE ref # 24880
Contig set: 5,302,395 bp
GenBank #: NEKL00000000 (NZ_NEKL00000000)
REBASE acronym: Eco148B
Org_num: 25881
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 52 | Uncharacterized protein | |||
| 53 | R | EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | Eco148BORFJP |
| 55 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.Eco148BORFJP |
| 57 | M | M.EcoS40ORF24345P (100% identity) | RTCANNNNNNCTC | M.Eco148BORFJP |
| 60 | Uncharacterized protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.SflFF12ORF4115P (45% identity) | M.Eco148BORFIP | |
| 2 | M | DNA replication helicase | M.Eco148BORFHP | |
| 1 | M | M.Eco685AORFLP (100% identity) | M.Eco148BORFGP | |
| 2 | 64 aa hypothetical protein | |||
| 3 | M | Methyltransferase | M.Eco148BORFFP | |
| 10 | NinB protein | |||
| 12 | M | M.Eco685AORFJP (100% identity) | M.Eco148BORFKP | |
| 17 | 66 aa hypothetical protein | |||
| 7 | LexA DNA binding domain protein | |||
| 10 | M | M.KpnHs33ORF24645P (100% identity) | GATC | M.Eco148BORFEP |
| 13 | Uncharacterized protein YfdN | |||
| 43 | Uncharacterized protein | |||
| 46 | M | M.Eco122EORFMP (100% identity) | M.Eco148BORFMP | |
| 81 | Phage/conjugal plasmid C-4 type zinc finger protein, TraR family | |||
| 83 | M | M.Eco685AORFAP (100% identity) | GATC | M.Eco148BORFBP |
| 84 | replication endonuclease from retron EC67 | |||
| 130 | Carboxylate/amino acid/amine transporter | |||
| 131 | V | V.Ecos2020DcmP (100% identity) | V.Eco148BDcmP | |
| 135 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco148BDcmP |
| 137 | HD domain protein | |||
| 118 | 125 aa hypothetical protein | |||
| 121 | M | M.Sso1099ORF735P (100% identity) | GATC | M.Eco148BORFCP |
| 125 | Regulator | |||
| 133 | Ribulose-phosphate 3-epimerase | |||
| 134 | M | Site-specific DNA-methyltransferase | GATC | M.Eco148BDamP |
| 137 | Cell division protein DamX | |||
| 171 | 87 aa hypothetical protein | |||
| 172 | R | Sso1099IP (100% identity) | CTGCAG | Eco148BORFDP |
| 173 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco148BORFDP |
| 175 | 95 aa hypothetical protein AU083_gp23 | |||
| 270 | 98 aa hypothetical protein | |||
| 272 | M | M.Eco685AORFBP (100% identity) | ATGCAT | M.Eco148BORFAP |
| 273 | periplasmic protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | 83 aa hypothetical protein | |||
| 2 | R | SflSTLE4McrBP (100% identity) | Eco148BMcrBP | |
| 3 | R | EcoZ151McrCP (100% identity) | Eco148BMcrCP | |
| 4 | Uncharacterized protein | |||