Aquitalea magnusonii H3 |
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Putative Aquitalea magnusonii H3 RM systems
Ref: Ishizawa,H. et al. Biotechnol Biofuels 10, 62 (2017)
REBASE ref # 24872
| Sequence length: | GenBank #: | |
| Chromosome: | 4,852,135 bp | AP018823 |
| Chromosome: | 4,749,945 bp | BDST00000000 (NZ_BDST00000000) |
REBASE acronym: AmaH3
Org_num: 25873
All begin DLM_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3401 | 734 aa hypothetical protein | |||
| 3402 | R | Psp53371ORFAP (91% identity) | AmaH3ORF23P | |
| 3403 | 200 aa hypothetical protein | |||
| 3404 | S | S.PpuW5ORF16460P (83% identity) | S.AmaH3ORF23P | |
| 3405 | M | M2.PaestS1ORF12350P (90% identity) | M.AmaH3ORF23P | |
| 3406 | bacterial regulatory proteins, AsnC family | |||
| Chromosome | ||||
| 19 | enzyme | |||
| 20 | R | Psp53371ORFAP (91% identity) | AmaH3ORF23P | |
| 21 | 200 aa hypothetical protein | |||
| 22 | S | S.PpuW5ORF16460P (83% identity) | S.AmaH3ORF23P | |
| 23 | M | M2.PaestS1ORF12350P (90% identity) | M.AmaH3ORF23P | |
| 24 | bacterial regulatory proteins, AsnC family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 336 | DNA helicase | |||
| 337 | M | M.BglHNORF15735P (78% identity) | M.AmaH3ORF4425P | |
| 338 | 460 aa hypothetical protein | |||
| 787 | elements of external origin, phage-related | |||
| 788 | M | M.AmaH3ORF3556P (93% identity) | M.AmaH3ORF2027P | |
| 789 | Mu-like prophage protein GP36 | |||
| 869 | 359 aa hypothetical protein | |||
| 870 | M | M.AmaH3ORF2027P (93% identity) | M.AmaH3ORF3556P | |
| 871 | elements of external origin, phage-related | |||
| 1244 | 477 aa hypothetical protein | |||
| ??? | M | M.Asp712ORFCP (96% identity) | M.AmaH3ORF449P | |
| 1246 | phage tail fiber assembly protein | |||
| 1296 | 412 aa hypothetical protein | |||
| 1297 | M | M.AmaH3ORF3556P (75% identity) | M.AmaH3ORF3252P | |
| 1298 | mobile element protein | |||
| 1308 | 397 aa hypothetical protein | |||
| ??? | M | M.AmaH3ORF449P (83% identity) | M.AmaH3ORF4016P | |
| 1310 | 308 aa hypothetical protein | |||
| 2088 | Mu-like prophage protein GP36 | |||
| 2089 | M | M.AmaH3ORF3556P (92% identity) | M.AmaH3ORF3612P | |
| 2090 | elements of external origin | |||
| 2662 | 222 aa hypothetical protein | |||
| 2663 | M | M.GmoMB1ORFGP (95% identity) | M.AmaH3ORF3766P | |
| 2664 | tail fiber assembly protein | |||
| 4091 | 49 aa hypothetical protein | |||
| ??? | C | C.Eac14ORFFP (47% identity) | C.AmaH3ORF3621P | |
| ??? | R | SspLF16ORFEP (35% identity) | AmaH3ORF3621P | |
| 4092 | M | M.Ssp30ORF32870P (50% identity) | M.AmaH3ORF3621P | |
| 4093 | 105 aa hypothetical protein | |||
| Chromosome | ||||
| 3251 | 412 aa hypothetical protein | |||
| 3252 | M | M.AmaH3ORF3556P (75% identity) | M.AmaH3ORF3252P | |
| 2026 | Mu-like prophage protein GP36 | |||
| 2027 | M | M.AmaH3ORF3556P (93% identity) | M.AmaH3ORF2027P | |
| 2028 | elements of external origin | |||
| 3555 | 359 aa hypothetical protein | |||
| 3556 | M | M.AmaH3ORF2027P (93% identity) | M.AmaH3ORF3556P | |
| 3557 | elements of external origin | |||
| 4015 | 397 aa hypothetical protein | |||
| ??? | M | M.AmaH3ORF449P (83% identity) | M.AmaH3ORF4016P | |
| 4017 | 308 aa hypothetical protein | |||
| 3620 | Msl3420 protein | |||
| 3621 | M | M.Ssp30ORF32870P (50% identity) | M.AmaH3ORF3621P | |
| ??? | R | SspLF16ORFEP (35% identity) | AmaH3ORF3621P | |
| ??? | C | C.Eac14ORFFP (47% identity) | C.AmaH3ORF3621P | |
| 3622 | 49 aa hypothetical protein | |||
| 3611 | elements of external origin | |||
| 3612 | M | M.AmaH3ORF3556P (92% identity) | M.AmaH3ORF3612P | |
| 3613 | Mu-like prophage protein GP36 | |||
| 3765 | 222 aa hypothetical protein | |||
| 3766 | M | M.GmoMB1ORFGP (95% identity) | M.AmaH3ORF3766P | |
| 3767 | tail fiber assembly protein | |||
| 4424 | Sll6055 protein | |||
| 4425 | M | M.BglHNORF15735P (78% identity) | M.AmaH3ORF4425P | |
| 4426 | DNA helicase | |||
| 448 | 477 aa hypothetical protein | |||
| ??? | M | M.Asp712ORFCP (96% identity) | M.AmaH3ORF449P | |
| 450 | phage tail fiber assembly protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3399 | 554 aa hypothetical protein | |||
| ??? | R | MspSC29McrCP (83% identity) | AmaH3McrCP | |
| 3401 | R | CspHMR1McrBP (93% identity) | AmaH3McrBP | |
| 3402 | type I restriction-modification system, | |||
| Chromosome | ||||
| 17 | 554 aa hypothetical protein | |||
| 18 | R | MspSC29McrCP (83% identity) | AmaH3McrCP | |
| 19 | R | CspHMR1McrBP (93% identity) | AmaH3McrBP | |
| 20 | type I restriction-modification system, | |||