Ref: Ishizawa,H. et al. Biotechnol Biofuels 10, 62 (2017)

REBASE ref # 24872

Sequence length:GenBank #:
Chromosome: 4,749,945 bp BDST00000000 (NZ_BDST00000000)
Chromosome: 4,852,135 bp AP018823

REBASE acronym: AmaH3

Org_num: 25873

 

All begin DLM_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
19 enzyme
20 R Axy162IP (0% identity) AmaH3ORF23P
21 200 aa hypothetical protein
22 S S.Axy162I (0% identity) S.AmaH3ORF23P
23 M M.PaeM28A1ORF15095P (0% identity) M.AmaH3ORF23P
24 bacterial regulatory proteins, AsnC family
 
Chromosome
 
3401 734 aa hypothetical protein
3402 R Axy162IP (0% identity) AmaH3ORF23P
3403 200 aa hypothetical protein
3404 S S.Axy162I (0% identity) S.AmaH3ORF23P
3405 M M.PaeM28A1ORF15095P (0% identity) M.AmaH3ORF23P
3406 bacterial regulatory proteins, AsnC family
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
3251 412 aa hypothetical protein
3252 M M.AmaH3ORF3556P (0% identity) M.AmaH3ORF3252P
 
2026 Mu-like prophage protein GP36
2027 M M.AmaH3ORF3556P (0% identity) M.AmaH3ORF2027P
2028 elements of external origin
 
3555 359 aa hypothetical protein
3556 M M.AmaH3ORF2027P (0% identity) M.AmaH3ORF3556P
3557 elements of external origin
 
4015 397 aa hypothetical protein
??? M M.AmaH3ORF449P (0% identity) M.AmaH3ORF4016P
4017 308 aa hypothetical protein
 
3620 Msl3420 protein
3621 M M.SrfI (0% identity) M.AmaH3ORF3621P
??? R Ese135ORFEP (0% identity) AmaH3ORF3621P
??? C C.Fps17830ORF11740P (0% identity) C.AmaH3ORF3621P
3622 49 aa hypothetical protein
 
3611 elements of external origin
3612 M M.AmaH3ORF3556P (0% identity) M.AmaH3ORF3612P
3613 Mu-like prophage protein GP36
 
3765 222 aa hypothetical protein
3766 M M.GmoMB1ORFGP (0% identity) M.AmaH3ORF3766P
3767 tail fiber assembly protein
 
4424 Sll6055 protein
4425 M M.PstYH1ORF19235P (0% identity) M.AmaH3ORF4425P
4426 DNA helicase
 
448 477 aa hypothetical protein
??? M M.AmaH3ORF4016P (0% identity) M.AmaH3ORF449P
450 phage tail fiber assembly protein
 
Chromosome
 
336 DNA helicase
337 M M.PstYH1ORF19235P (0% identity) M.AmaH3ORF4425P
338 460 aa hypothetical protein
 
787 elements of external origin, phage-related
788 M M.AmaH3ORF3556P (0% identity) M.AmaH3ORF2027P
789 Mu-like prophage protein GP36
 
869 359 aa hypothetical protein
870 M M.AmaH3ORF2027P (0% identity) M.AmaH3ORF3556P
871 elements of external origin, phage-related
 
1244 477 aa hypothetical protein
??? M M.AmaH3ORF4016P (0% identity) M.AmaH3ORF449P
1246 phage tail fiber assembly protein
 
1296 412 aa hypothetical protein
1297 M M.AmaH3ORF3556P (0% identity) M.AmaH3ORF3252P
1298 mobile element protein
 
1308 397 aa hypothetical protein
??? M M.AmaH3ORF449P (0% identity) M.AmaH3ORF4016P
1310 308 aa hypothetical protein
 
2088 Mu-like prophage protein GP36
2089 M M.AmaH3ORF3556P (0% identity) M.AmaH3ORF3612P
2090 elements of external origin
 
2662 222 aa hypothetical protein
2663 M M.GmoMB1ORFGP (0% identity) M.AmaH3ORF3766P
2664 tail fiber assembly protein
 
4091 49 aa hypothetical protein
??? C C.Fps17830ORF11740P (0% identity) C.AmaH3ORF3621P
??? R Ese135ORFEP (0% identity) AmaH3ORF3621P
4092 M M.SrfI (0% identity) M.AmaH3ORF3621P
4093 105 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
17 554 aa hypothetical protein
18 R MspSC29McrCP (0% identity) AmaH3McrCP
19 R CspHMR1McrBP (0% identity) AmaH3McrBP
20 type I restriction-modification system,
 
Chromosome
 
3399 554 aa hypothetical protein
??? R MspSC29McrCP (0% identity) AmaH3McrCP
3401 R CspHMR1McrBP (0% identity) AmaH3McrBP
3402 type I restriction-modification system,