Yersinia kristensenii CFSAN060539 |
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Putative Yersinia kristensenii CFSAN060539 RM systems
Ref: Campioni,F. unpublished
REBASE ref # 24858
Contig set: 4,681,176 bp
GenBank #: NHOF00000000 (NZ_NHOF00000000)
REBASE acronym: Ykr60539
Org_num: 25859
All begin CBW54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13215 | toll/interleukin-1 receptor domain-containing | |||
| 13220 | R | Yen20ORF67P (100% identity) | Ykr60539ORF13225P | |
| 13225 | M | M.Eco1808ORF130P (96% identity) | M.Ykr60539ORF13225P | |
| 13230 | S | S.Yen20ORF67P (100% identity) | S.Ykr60539ORF13225P | |
| 13235 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9790 | 95 aa hypothetical protein | |||
| ??? | M | M.VspHMW22ORFJP (62% identity) | M.Ykr60539ORF9795P | |
| 22190 | 139 aa hypothetical protein | |||
| 22195 | R | TspTA1ORF16370P (98% identity) | Ykr60539ORF22200P | |
| 22200 | M | M.TspTA1ORF7625P (97% identity) | M.Ykr60539ORF22200P | |
| 22205 | DNA invertase | |||
| 15840 | 78 aa hypothetical protein | |||
| 15845 | M | M.UspKW1ORF2907P (56% identity) | M.Ykr60539ORF15845P | |
| 15850 | 62 aa hypothetical protein | |||
| 10465 | 60 aa hypothetical protein | |||
| 10470 | M | M.Ysp713ORF7210P (79% identity) | M.Ykr60539ORF10470P | |
| 10475 | 122 aa hypothetical protein | |||
| 3055 | 62 aa hypothetical protein | |||
| 3060 | M | M.YenPY54ORFAP (96% identity) | M.Ykr60539ORF3060P | |
| 3065 | 77 aa hypothetical protein | |||
| 1480 | 177 aa hypothetical protein | |||
| 1485 | M | M.EcoPF16ORF3965P (100% identity) | M.Ykr60539ORF1485P | |
| 1490 | DUF2441 domain-containing protein | |||
| 11045 | 801 aa hypothetical protein | |||
| 11050 | M | M.Yen20ORF405P (99% identity) | M.Ykr60539ORF11050P | |
| 11055 | 114 aa hypothetical protein | |||
| 2480 | DNA polymerase III subunit epsilon | |||
| 2485 | M | M.YpsM89ORF15220P (91% identity) | M1.Ykr60539ORF2485P | |
| 2490 | M | M2.Ykr4030ORF17400P (77% identity) | M2.Ykr60539ORF2485P | |
| 2495 | replication protein | |||
| 4705 | SPOR domain-containing protein | |||
| 4710 | M | M.Yen20DamP (100% identity) | GATC | M.Ykr60539DamP |
| 4715 | ribulose-phosphate 3-epimerase | |||
| 9760 | RepB family plasmid replication initiator | |||
| 9765 | M | M.PvuII (94% identity) | M.Ykr60539ORF9765P | |
| 9770 | C | C.PvuII (94% identity) | C.Ykr60539ORF9765P | |
| 9775 | R | PvuII (97% identity) | CAGCTG | Ykr60539ORF9765P |
| 9780 | 470 aa hypothetical protein | |||
| 6050 | 415 aa hypothetical protein | |||
| 6055 | M | M.Yen20ORF1184P (100% identity) | M.Ykr60539ORF6055P | |
| 6060 | 155 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15640 | transposase | |||
| 15645 | R | Ppa5486ORF19080P (93% identity) | Ykr60539ORF15650P | |
| 15650 | M | M.Squ13189I (94% identity) | M.Ykr60539ORF15650P | |
| 15655 | 291 aa hypothetical protein | |||