Weissella paramesenteroides FDAARGOS_414 |
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Putative Weissella paramesenteroides FDAARGOS_414 RM systems
Ref: Minogue,T. et al. unpublished
REBASE ref # 25231
Complete sequence: 1,947,910 bp
GenBank #: CP023501
REBASE acronym: Wpa414
Org_num: 26186
All begin CO680_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1035 | 117 aa hypothetical protein | |||
| 1040 | R | WciJW15ORF12180P (77% identity) | Wpa414ORF1045P | |
| 1045 | M | M.PpeYK1ORFAP (86% identity) | M.Wpa414ORF1045P | |
| 1050 | S | S.Lrh21ORF11P (33% identity) | S1.Wpa414ORF1045P | |
| 1055 | S | S1.Bpu130ORF8690P (31% identity) | S2.Wpa414ORF1045P | |
| 1060 | S | S4.Lla40ORF5530P (70% identity) | S3.Wpa414ORF1045P | |
| 1065 | site-specific integrase | |||
| 8365 | pyruvate oxidase | |||
| 8370 | R | WpaW31ORF9915P (98% identity) | Wpa414ORF8375P | |
| 8375 | M | M.WpaW31ORF9915P (98% identity) | M.Wpa414ORF8375P | |
| ??? | S | S2.WpaW31ORF9915P (48% identity) | S1.Wpa414ORF8375P | |
| ??? | S | S1.HspM105ORF21030P (35% identity) | S2.Wpa414ORF8375P | |
| 8385 | S | S2.Osi15228ORF7335P (53% identity) | S3.Wpa414ORF8375P | |
| 8390 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 520 | 30S ribosomal protein S9 | |||
| 525 | R | Wco830DptFP (53% identity) | Wpa414DptFP | |
| 530 | DNA phosphorothioation-dependent restriction | |||
| 525 | DNA phosphorothioation-dependent restriction | |||
| 530 | R | Wco830DptGP (44% identity) | Wpa414DptGP | |
| 535 | DUF87 domain-containing protein | |||
| 530 | DNA phosphorothioation-dependent restriction | |||
| 535 | R | Wco830DptHP (47% identity) | Wpa414DptHP | |
| 540 | 85 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8390 | site-specific integrase | |||
| 8395 | R | WpaW31MrrP (99% identity) | Wpa414MrrP | |
| 8400 | formate-nitrite transporter | |||