Rhizorhabdus dicambivorans Ndbn-20 |
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Putative Rhizorhabdus dicambivorans Ndbn-20 RM systems
Ref: Yao,L. et al. Appl. Environ. Microbiol. 82 (18), 5621-5630 (2016)
REBASE ref # 25220
Complete sequence: 5,026,772 bp
GenBank #: CP023449
REBASE acronym: Rdi20
Org_num: 26156
All begin CMV14_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 345 | glutamate synthase | |||
| ??? | M | M.Swi218ORF16340P (25% identity) | M.Rdi20ORF355P | |
| 360 | LysR family transcriptional regulator | |||
| 7150 | 142 aa hypothetical protein | |||
| 7155 | M | M.SwiDP58ORFBP (56% identity) | M.Rdi20ORF7155P | |
| 7160 | 307 aa hypothetical protein | |||
| 12985 | DUF499 domain-containing protein | |||
| 12990 | M | M.XauORF2991P (95% identity) | M.Rdi20ORF12990P | |
| 12995 | ATPase | |||
| 13250 | 600 aa hypothetical protein | |||
| 13255 | R | Scl10874ORF1020690P (81% identity) | Rdi20ORF13260P | |
| 13260 | M | M.Mop232BORF16375P (74% identity) | M.Rdi20ORF13260P | |
| 13265 | conjugal transfer protein TraG | |||
| 15725 | conjugal transfer protein TraG | |||
| 15730 | M | M.Hsp19H1DndBP (93% identity) | M.Rdi20DndBP | |
| ??? | Phosphoadenosine phosphosulfate reductase | |||
| 15730 | DNA sulfur modification protein DndB | |||
| ??? | M | M.Hsp19H1DndCP (71% identity) | M.Rdi20DndCP | |
| 15740 | DNA sulfur modification protein DndD | |||
| ??? | Phosphoadenosine phosphosulfate reductase | |||
| 15740 | M | M.Hsp19H1DndDP (87% identity) | M.Rdi20DndDP | |
| 15745 | DNA sulfur modification protein DndE | |||
| 15745 | DNA sulfur modification protein DndE | |||
| 15750 | M | M.Hsp19H1DndAP (81% identity) | M.Rdi20DndAP | |
| 15755 | DUF262 domain-containing protein | |||
| 16300 | 325 aa hypothetical protein | |||
| 16305 | RM | SspH107ORF17730P (89% identity) | Rdi20ORF16305P | |
| 16310 | conjugal transfer protein TraD | |||
| 17485 | 535 aa hypothetical protein | |||
| 17490 | M | M.SspSRS2ORF3145P (89% identity) | M.Rdi20ORF17490P | |
| 17495 | 114 aa hypothetical protein | |||
| 17970 | DUF3363 domain-containing protein | |||
| 17975 | V | V.SgrE30ORF11550P (69% identity) | V.Rdi20ORF17980P | |
| 17980 | M | M.SspCra20ORF11580P (69% identity) | M.Rdi20ORF17980P | |
| 17985 | R | Rlu629ORF21680P (75% identity) | Rdi20ORF17980P | |
| 17990 | 266 aa hypothetical protein | |||
| 18815 | 500 aa hypothetical protein | |||
| 18820 | M | M.SspS611ORF5745P (45% identity) | M.Rdi20ORF18820P | |
| 18825 | 195 aa hypothetical protein | |||
| 22280 | 155 aa hypothetical protein | |||
| 22285 | M | M.SspC32DndCP (84% identity) | M.Rdi20DndC2P | |
| 22290 | DNA sulfur modification protein DndD | |||
| 22285 | DNA phosphorothioation system sulfurtransferase | |||
| 22290 | M | M.SspC32DndDP (73% identity) | M.Rdi20DndD2P | |
| 22295 | DNA sulfur modification protein DndE | |||