Clostridium chauvoei DSM 7528 |
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Putative Clostridium chauvoei DSM 7528 RM systems
Ref: Thomas,P. et al. Infect. Genet. Evol. 54, 287-298 (2017)
REBASE ref # 24958
Complete sequence: 2,872,664 bp
GenBank #: CP018624
REBASE acronym: Cch7528
Org_num: 25726
All begin BTM21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1400 | 23S rRNA (uracil-5-)-methyltransferase RumA | |||
| 1405 | M | M.Cch467I (100% identity) | GAANNNNNNNTTGG | M.Cch7528I |
| ??? | S | Type I restriction-modification system specificity subunit | GAANNNNNNNTTGG | S1.Cch7528I |
| ??? | S | S1.Cch467I (61% identity) | GAANNNNNNNTTGG | S2.Cch7528I |
| 1415 | integrase | |||
| ??? | Uncharacterized protein | |||
| 1430 | R | Cch467IP (99% identity) | GAANNNNNNNTTGG | Cch7528IP |
| 1435 | PucR family transcriptional regulator | |||
| 1415 | integrase | |||
| ??? | S | S2.Cch467IP (100% identity) | S3.Cch7528ORF1405P | |
| 1430 | DEAD/DEAH box helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2905 | 1218 aa hypothetical protein | |||
| 2910 | RM | Cch467III (100% identity) | GNGAAAY | Cch7528III |
| 2915 | 341 aa hypothetical protein | |||
| 3355 | 672 aa hypothetical protein | |||
| 3360 | M | M.Cch467II (100% identity) | GTATAC | M.Cch7528II |
| 3365 | sporulation membrane protein YtaF | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2140 | peptidase S8 and S53 subtilisin kexin sedolisin | |||
| 2145 | R | Cch467ORF10875P (100% identity) | Cch7528ORF2145P | |
| 2150 | DDE transposase | |||
| 8475 | RNA-binding protein | |||
| 8480 | R | Cch467MrrP (100% identity) | Cch7528MrrP | |
| 8485 | 216 aa hypothetical protein | |||