Lactococcus raffinolactis WiKim0068 |
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Putative Lactococcus raffinolactis WiKim0068 RM systems
Ref: Jung,M.Y. and Lee,S.H. unpublished
REBASE ref # 24132
| Sequence length: | GenBank #: | |
| Chromosome: | 2,217,417 bp | CP023392 |
| plasmid pWiKim0068-2: | 27,065 bp | CP023394 |
REBASE acronym: Lra68
Org_num: 25656
All begin CMV25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 65 | zeta toxin family protein | |||
| 70 | S | S4.Lra68III (22% identity) | CNGANNNNNNNNTAC | S.Lra68IV |
| 75 | 149 aa hypothetical protein | |||
| 70 | 435 aa hypothetical protein | |||
| 75 | S | S1.Lsp19320I (18% identity) | S2.Lra68IIIP | |
| 80 | integrase | |||
| 85 | S | S.Csp93257ORF8150P (16% identity) | S3.Lra68IIIP | |
| 90 | S | S1.Lsp19320I (48% identity) | GAAYNNNNNNNTGG | S4.Lra68III |
| 95 | M | M.EfaE509ORF13930P (88% identity) | GAAYNNNNNNNTGG | M.Lra68III |
| 100 | R | EfaE509ORF13930P (77% identity) | GAAYNNNNNNNTGG | Lra68IIIP |
| 105 | elongation factor 4 | |||
| plasmid pWiKim0068-2 | ||||
| 11175 | IS982 family transposase | |||
| 11180 | R | Lra1914ORF11485P (99% identity) | GYTANNNNNNGTA | Lra68IIP |
| 11185 | M | M.LlaA12ORF1723P (99% identity) | GYTANNNNNNGTA | M.Lra68II |
| 11190 | S | S.LlaIBB417ORF12640P (65% identity) | GYTANNNNNNGTA | S.Lra68II |
| 11195 | 281 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2925 | 146 aa hypothetical protein | |||
| 2930 | RM | Lra194SORF265P (87% identity) | GTTCNAG | Lra68I |
| 2935 | 68 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1580 | prenyltransferase | |||
| 1585 | R | Lra197ORF8315P (99% identity) | Lra68ORF1585P | |
| 1590 | 8-oxo-dGTP diphosphatase MutT | |||