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Putative Caulobacter vibrioides CB1 RM systems
Ref: Ely,B. et al. unpublished
REBASE ref # 25111
Complete sequence: 4,137,285 bp
GenBank #: CP023314
REBASE acronym: CviCB1
Org_num: 25917
All begin CA607_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3305 | 660 aa hypothetical protein | |||
3310 | M | M.CviS2BORF3205P (100% identity) | CGACNNNNNNNTRGG | M.CviCB1ORF3310P |
3315 | S | S.CviS2BORF3205P (100% identity) | CGACNNNNNNNTRGG | S.CviCB1ORF3310P |
3320 | restriction endonuclease | |||
3325 | R | CviS2BORF3205P (100% identity) | CGACNNNNNNNTRGG | CviCB1ORF3310P |
3330 | IS3 family transposase ISCc3 | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1935 | A/G-specific adenine glycosylase | |||
1940 | M | M.CviS2BORF1945P (100% identity) | GANTC | M.CviCB1ORF1940P |
1945 | ribonuclease HII | |||
4390 | 272 aa hypothetical protein | |||
4395 | RM | CviS2BORF4310P (100% identity) | CGACCAG | CviCB1ORF4395P |
4400 | DUF1178 domain-containing protein | |||
5495 | 411 aa hypothetical protein | |||
5500 | M | M.CviS2BORF5415P (100% identity) | YGCCGGCR | M.CviCB1ORF5500P |
5505 | elongation factor 4 | |||
19440 | hybrid sensor histidine kinase/response | |||
19445 | V | V.CviS2BORF19185P (100% identity) | V.CviCB1ORF19455P | |
19450 | cysteine synthase A | |||
19455 | M | M.CviS2BORF19185P (100% identity) | GGCGCC | M.CviCB1ORF19455P |
19460 | 144 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
3315 | restriction endonuclease subunit S | |||
3320 | R | CviS2BMrrP (100% identity) | CviCB1MrrP | |
3325 | type I restriction endonuclease subunit R |