Escherichia coli 1428 |
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Putative Escherichia coli 1428 RM systems
Ref: Argyle,S.A. unpublished
REBASE ref # 25109
| Sequence length: | GenBank #: | |
| Chromosome: | 4,986,712 bp | CP023366 |
| plasmid p48: | 48,774 bp | CP023368 |
| plasmid p66: | 66,332 bp | CP023369 |
| plasmid p96: | 96,402 bp | CP023370 |
REBASE acronym: Eco1428
Org_num: 25848
All begin CNQ52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21145 | Mrr restriction system protein | |||
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | Eco1428ORF21155P |
| 21155 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco1428ORF21155P |
| 21160 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco1428ORF21155P |
| 21165 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2180 | cell division protein DamX | |||
| 2185 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1428DamP |
| 2190 | ribulose-phosphate 3-epimerase | |||
| 2745 | transporter | |||
| 2750 | M | M.Ecos142ORF2405P (100% identity) | M.Eco1428ORF2750P | |
| 2755 | Fis family transcriptional regulator | |||
| 9865 | phosphohydrolase | |||
| 9870 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco1428DcmP |
| 9875 | V | V.SsoSE61DcmP (100% identity) | V.Eco1428DcmP | |
| 9880 | drug/metabolite exporter YedA | |||
| 23275 | phage holin, lambda family | |||
| 23280 | M | M.SflLIN17ORF17405P (99% identity) | M.Eco1428ORF23280P | |
| 23285 | 67 aa hypothetical protein | |||
| plasmid p48 | ||||
| 26205 | 92 aa hypothetical protein | |||
| 26215 | M | M.Kae61ORF24310P (100% identity) | M.Eco1428ORF26215P | |
| 26220 | 89 aa hypothetical protein | |||
| plasmid p66 | ||||
| 26465 | 0 aa hypothetical protein | |||
| 26470 | M | M.Ecos69ORF26765P (99% identity) | M.Eco1428ORF26470P | |
| 26475 | 73 aa hypothetical protein | |||
| plasmid p96 | ||||
| 26980 | 0 aa hypothetical protein | |||
| 26985 | M | M.StyR64ORFAP (100% identity) | M.Eco1428ORF26985P | |
| 26990 | 74 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21140 | GTPase | |||
| 21145 | R | SenHNK130MrrP (100% identity) | Eco1428MrrP | |
| ??? | Type I restriction enzyme EcoKI R protein | |||
| 21165 | endoribonuclease SymE | |||
| 21170 | R | SenHNK130McrBP (100% identity) | Eco1428McrBP | |
| 21175 | R | SenHNK130McrCP (100% identity) | Eco1428McrCP | |