Salmonella enterica subsp. enterica serovar Saintpaul SGB23 |
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Putative Salmonella enterica subsp. enterica serovar Saintpaul SGB23 RM systems
Ref: Ding,Y. et al. unpublished
REBASE ref # 25097
| Sequence length: | GenBank #: | |
| Chromosome: | 4,792,385 bp | CP023166 |
| plasmid pSGB23: | 254,041 bp | CP023167 |
REBASE acronym: Sen23
Org_num: 25804
All begin CK947_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20690 | restriction endonuclease | |||
| 20695 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen23IP |
| 20700 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen23I |
| 20705 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen23I |
| 20710 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1840 | cell division protein DamX | |||
| 1845 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen23Dam |
| 1850 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 domain-containing protein | |||
| 2345 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen23III |
| 2350 | Fis family transcriptional regulator | |||
| 9775 | phosphohydrolase | |||
| 9780 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen23DcmP |
| 9785 | V | V.StyUK1DcmP (100% identity) | V.Sen23DcmP | |
| 9790 | drug/metabolite exporter YedA | |||
| 20875 | 70 aa hypothetical protein | |||
| 20880 | M | M.SspZ69DndBP (100% identity) | M.Sen23DndBP | |
| 20885 | DNA phosphorothioation system sulfurtransferase | |||
| 20880 | DNA sulfur modification protein DndB | |||
| 20885 | M | M.SenS25DndCP (100% identity) | M.Sen23DndCP | |
| 20890 | DNA sulfur modification protein DndD | |||
| 20885 | DNA phosphorothioation system sulfurtransferase | |||
| 20890 | M | M.SenS25DndDP (100% identity) | M.Sen23DndDP | |
| 20895 | DUF1832 domain-containing protein | |||
| 20890 | DNA sulfur modification protein DndD | |||
| 20895 | M | M.SspZ69DndEP (100% identity) | M.Sen23DndEP | |
| 20900 | DUF262 domain-containing protein | |||
| 20900 | DUF262 domain-containing protein | |||
| 20905 | R | SenS25DptHP (100% identity) | Sen23DptHP | |
| 20910 | DNA phosphorothioation-dependent restriction | |||
| 20910 | DNA phosphorothioation-dependent restriction | |||
| 20915 | R | SenS25DptFP (100% identity) | Sen23DptFP | |
| 20920 | integrase | |||
| 20910 | R | SspZ69DptGP (100% identity) | Sen23DptGP | |
| 20915 | DNA phosphorothioation-dependent restriction | |||
| plasmid pSGB23 | ||||
| 24700 | TIGR02687 family protein | |||
| 24705 | RM | SenPK1ORF23900P (100% identity) | ATGAAG | Sen23IV |
| 24710 | DUF262 domain-containing protein | |||
| 25125 | 56 aa hypothetical protein | |||
| 25130 | M | M.LspG3LORF130P (100% identity) | M.Sen23ORF25130P | |
| 25135 | nuclease | |||
| 25710 | DNA-binding protein | |||
| 25715 | M | M.Sens770ORF22135P (100% identity) | M.Sen23ORF25715P | |
| 25720 | 273 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18340 | 33 aa hypothetical protein | |||
| 18345 | R | StyUK1IP (99% identity) | CAGAG | Sen23IIP |
| 18350 | M | M.SenWT7II (100% identity) | CAGAG | M.Sen23II |
| 18355 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20685 | 95 aa hypothetical protein | |||
| 20690 | R | StyUK1MrrP (100% identity) | Sen23MrrP | |
| 20695 | type I restriction-modification system | |||