[Eubacterium] hallii |
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Putative [Eubacterium] hallii RM systems
Ref: Shetty,A.S. unpublished
REBASE ref # 25084
| Sequence length: | GenBank #: | |
| chromosome I: | 3,515,670 bp | LT907848 |
| chromosome I: | 3,515,670 bp | LT907978 |
REBASE acronym: EhaEH1
Org_num: 25782
All begin EHL_, EHLA_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1741 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1742 | S | S2.CsocetoORF16325P (55% identity) | S.EhaEH1ORF1742P | |
| 1743 | 31 aa Hypothetical protein | |||
| 1887 | Integrase, catalytic domain | |||
| 1888 | R | PmeBin348ORFEP (97% identity) | EhaEH1ORF1895P | |
| 1889 | 156 aa Hypothetical protein | |||
| 1890 | Protein of unknown function (DUF3990) | |||
| 1891 | S | S1.Lba14ORF26640P (45% identity) | S1.EhaEH1ORF1895P | |
| 1892 | 149 aa Hypothetical protein | |||
| 1893 | Protein of unknown function (DUF3990) | |||
| 1894 | S | S1.PmeBin156ORFDP (54% identity) | S2.EhaEH1ORF1895P | |
| 1895 | M | M.PmeBin46ORFAP (94% identity) | M.EhaEH1ORF1895P | |
| 1896 | 23S rRNA (guanosine2251-2-O)-methyltransferase | |||
| 2575 | 400 aa Hypothetical protein | |||
| 2576 | R | CscWT3DORFDP (100% identity) | EhaEH1ORF2578P | |
| 2577 | S | S.CscWT3DORFDP (100% identity) | S.EhaEH1ORF2578P | |
| 2578 | M | M.CscWT3DORFDP (100% identity) | M.EhaEH1ORF2578P | |
| 2579 | C | C.PmeBin209ORFCP (100% identity) | C.EhaEH1ORF2578P | |
| 2580 | YodL-like | |||
| chromosome I | ||||
| 1887 | Integrase, catalytic domain | |||
| 1888 | R | PmeBin348ORFEP (97% identity) | EhaEH1ORF1895P | |
| 1889 | 156 aa Hypothetical protein | |||
| 1890 | Protein of unknown function (DUF3990) | |||
| 1891 | S | S1.Lba14ORF26640P (45% identity) | S1.EhaEH1ORF1895P | |
| 1892 | 149 aa Hypothetical protein | |||
| 1893 | Protein of unknown function (DUF3990) | |||
| 1894 | S | S1.PmeBin156ORFDP (54% identity) | S2.EhaEH1ORF1895P | |
| 1895 | M | M.PmeBin46ORFAP (94% identity) | M.EhaEH1ORF1895P | |
| 1896 | 23S rRNA (guanosine2251-2-O)-methyltransferase | |||
| 2575 | 400 aa Hypothetical protein | |||
| 2576 | R | CscWT3DORFDP (100% identity) | EhaEH1ORF2578P | |
| 2577 | S | S.CscWT3DORFDP (100% identity) | S.EhaEH1ORF2578P | |
| 2578 | M | M.CscWT3DORFDP (100% identity) | M.EhaEH1ORF2578P | |
| 2579 | C | C.PmeBin209ORFCP (100% identity) | C.EhaEH1ORF2578P | |
| 2580 | YodL-like | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1532 | 143 aa Hypothetical protein | |||
| 1533 | M | M.Lba6163ORF2606P (88% identity) | M.EhaEH1ORF1533P | |
| ??? | R | Lba6163ORF2606P (71% identity) | EhaEH1ORF1533P | |
| 1536 | DNA-directed RNA polymerase | |||
| 2189 | Homeodomain-like domain | |||
| 2190 | M | M.PmeBin95ORFCP (87% identity) | M.EhaEH1ORF2190P | |
| 2191 | 53 aa Hypothetical protein | |||
| 2529 | KAP family P-loop domain | |||
| 2530 | R | Sin30303ORF5005P (96% identity) | EhaEH1ORF2531P | |
| 2531 | M | M.AhaPEL85ORFIP (97% identity) | M.EhaEH1ORF2531P | |
| 2532 | Arc-type ribbon-helix-helix | |||
| chromosome I | ||||
| 1532 | 143 aa Hypothetical protein | |||
| 1533 | M | M.Lba6163ORF2606P (88% identity) | M.EhaEH1ORF1533P | |
| ??? | R | Lba6163ORF2606P (71% identity) | EhaEH1ORF1533P | |
| 1536 | DNA-directed RNA polymerase | |||
| 2189 | Homeodomain-like domain | |||
| 2190 | M | M.PmeBin95ORFCP (87% identity) | M.EhaEH1ORF2190P | |
| 2191 | 53 aa Hypothetical protein | |||
| 2529 | KAP family P-loop domain | |||
| 2530 | R | Sin30303ORF5005P (96% identity) | EhaEH1ORF2531P | |
| 2531 | M | M.AhaPEL85ORFIP (97% identity) | M.EhaEH1ORF2531P | |
| 2532 | Arc-type ribbon-helix-helix | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1491 | 495 aa Hypothetical protein | |||
| 1492 | M | M.Cco4ORF2825P (48% identity) | M.EhaEH1ORF1492P | |
| 1493 | 68 aa Hypothetical protein | |||
| 1494 | R | Rto36209ORF25860P (98% identity) | EhaEH1ORF1492P | |
| 1495 | Fido domain profile. | |||
| chromosome I | ||||
| 1491 | 495 aa Hypothetical protein | |||
| 1492 | M | M.Cco4ORF2825P (48% identity) | M.EhaEH1ORF1492P | |
| 1493 | 68 aa Hypothetical protein | |||
| 1494 | R | Rto36209ORF25860P (98% identity) | EhaEH1ORF1492P | |
| 1495 | Fido domain profile. | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 578 | 189 aa Hypothetical protein | |||
| 579 | R | Chi13275ORFAP (45% identity) | EhaEH1ORF579P | |
| 580 | Reverse transcriptase domain | |||
| chromosome I | ||||
| 578 | 189 aa Hypothetical protein | |||
| 579 | R | Chi13275ORFAP (45% identity) | EhaEH1ORF579P | |
| 580 | Reverse transcriptase domain | |||