Corynebacterium diphtheriae c111 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Corynebacterium diphtheriae c111 RM systems
Ref: Ahmad,N. et al. unpublished
REBASE ref # 20366
Contig set: 2,529,148 bp
GenBank #: NDHU00000000 (NZ_NDHU00000000)
REBASE acronym: Cdic111
Org_num: 25551
All begin B1A51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3920 | DUF2326 domain-containing protein | |||
| 3925 | C | C.Cdi597ORF2100P (100% identity) | C.Cdic111ORF3930P | |
| 3930 | M | M.Cdi597ORF2100P (100% identity) | M.Cdic111ORF3930P | |
| 3935 | S | S.Cdi597ORF2100P (100% identity) | S.Cdic111ORF3930P | |
| 3940 | R | Cdi597ORF2100P (100% identity) | Cdic111ORF3930P | |
| 3945 | restriction endonuclease subunit M | |||
| 3940 | restriction endonuclease subunit R | |||
| 3945 | M | M.Cdi597ORF2085P (100% identity) | M.Cdic111ORF3945P | |
| 3950 | R | Cdim74ORF1625P (73% identity) | Cdic111ORF3945P | |
| 3955 | transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5025 | 77 aa hypothetical protein | |||
| ??? | RM | CdiWD65ORF4655P (100% identity) | Cdic111ORF5030P | |
| 5050 | ATP-dependent helicase | |||
| 10225 | 119 aa hypothetical protein | |||
| 10230 | RM | Cdi82420ORF2010P (99% identity) | Cdic111ORF10230P | |
| 10235 | IS6 family transposase | |||
| 2250 | restriction endonuclease | |||
| 2255 | RM | Cdic25ORF4430P (99% identity) | GCGGAG | Cdic111ORF2255P |
| 2260 | 219 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11655 | fimbrial assembly protein | |||
| 11660 | R | Cdi523ORF10475P (97% identity) | Cdic111ORF11665P | |
| 11665 | M | M.Cdi693ORF8325P (100% identity) | M.Cdic111ORF11665P | |
| 11670 | DNA helicase | |||
| 2765 | TIGR02391 family protein | |||
| 2770 | R | Cdic488ORF202385P (100% identity) | Cdic111ORF2775P | |
| ??? | M | M.Cdic324ORF2370P (100% identity) | M.Cdic111ORF2775P | |
| 2785 | 497 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1110 | galactokinase | |||
| 1115 | R | Cdic488ORF201130P (99% identity) | Cdic111ORF1115P | |
| 1120 | DNA mismatch repair protein MutT | |||