Vibrio anguillarum VIB43 |
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Putative Vibrio anguillarum VIB43 RM systems
Ref: Holm,K.O. et al. unpublished
REBASE ref # 25060
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,239,943 bp | CP023054 |
| chromosome 2: | 1,152,744 bp | CP023055 |
| plasmid p15: | 15,178 bp | CP023056 |
REBASE acronym: VanVIB43
Org_num: 25716
All begin CK207_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2495 | 380 aa hypothetical protein | |||
| 2500 | S | S.VspJ502ORF10755P (100% identity) | S.VanVIB43ORF2505P | |
| 2505 | M | M.VspJ502ORF10755P (100% identity) | M.VanVIB43ORF2505P | |
| 2510 | ATP-binding protein | |||
| ??? | R | VanHI610ORF11440P (100% identity) | VanVIB43ORF2505P | |
| 2520 | AAA family ATPase | |||
| 4490 | restriction endonuclease | |||
| 4495 | R | VspJ502ORF8900P (100% identity) | VanVIB43ORF4500P | |
| 4500 | M | M.VspJ502ORF8900P (100% identity) | M.VanVIB43ORF4500P | |
| 4505 | S | S.VspJ502ORF8900P (100% identity) | S.VanVIB43ORF4500P | |
| 4510 | chromosome segregation protein SMC | |||
| 10500 | M48 family peptidase | |||
| 10505 | R | VspJ502ORF3100P (100% identity) | VanVIB43ORF10525P | |
| 10510 | ATP-dependent DNA helicase RecG | |||
| 10515 | histidinol-phosphatase | |||
| 10520 | S | S.VspJ502ORF3100P (100% identity) | S.VanVIB43ORF10525P | |
| 10525 | M | M.VspJ502ORF3100P (100% identity) | M.VanVIB43ORF10525P | |
| 10530 | transcription factor | |||
| chromosome 2 | ||||
| 19520 | 462 aa hypothetical protein | |||
| 19525 | S | S.VspJ502ORF17550P (100% identity) | S.VanVIB43ORF19530P | |
| 19530 | M | M.VspJ502ORF17550P (100% identity) | M.VanVIB43ORF19530P | |
| 19535 | R | VspJ502ORF17550P (100% identity) | VanVIB43ORF19530P | |
| 19540 | 494 aa hypothetical protein | |||
| plasmid p15 | ||||
| 20645 | 76 aa hypothetical protein | |||
| ??? | S | S.VspJ502ORF8900P (44% identity) | S.VanVIB43ORF20665P | |
| 20660 | 65 aa hypothetical protein | |||
| 20665 | M | M.VspJ502ORF8900P (94% identity) | M.VanVIB43ORF20665P | |
| 20670 | R | VspJ502ORF8900P (99% identity) | VanVIB43ORF20665P | |
| 20675 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2390 | glutamine--fructose-6-phosphate transaminase | |||
| 2395 | M | M.Van21597ORF13805P (100% identity) | M.VanVIB43ORF2395P | |
| 2400 | 260 aa hypothetical protein | |||
| 4225 | HNH endonuclease | |||
| 4230 | M | M.VspJ502ORF9195P (100% identity) | M.VanVIB43ORF4230P | |
| 4235 | histidine kinase | |||
| 7720 | regulator | |||
| 7725 | M | M.Vfl12605ORFFP (65% identity) | M.VanVIB43ORF7725P | |
| 7730 | toxin | |||
| 9440 | 135 aa hypothetical protein | |||
| 9445 | R | VanHI610ORF5855P (100% identity) | VanVIB43ORF9450P | |
| 9450 | M | M.VspJ502ORF4160P (100% identity) | M.VanVIB43ORF9450P | |
| 9455 | exodeoxyribonuclease III | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4485 | XRE family transcriptional regulator | |||
| 4490 | R | VspJ502ORF8910P (95% identity) | VanVIB43MrrP | |
| 4495 | type I restriction-modification system | |||
| plasmid p15 | ||||
| 20670 | type I restriction-modification system | |||
| 20675 | R | VspJ502ORF8910P (95% identity) | VanVIB43MrrP | |
| 20680 | XRE family transcriptional regulator | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13560 | ribulose-phosphate 3-epimerase | |||
| 13565 | M | M.VspJ502DamP (100% identity) | M.VanVIB43ORF13565P | |
| 13570 | cell division protein DamX | |||