Mannheimia haemolytica 187 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Mannheimia haemolytica 187 RM systems
Ref: Harhay,G.P. et al. unpublished
REBASE ref # 25007
Complete sequence: 2,746,467 bp
GenBank #: CP023046
REBASE acronym: Mha187
Org_num: 25589
All begin CKG21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1765 | bifunctional glutamate--cysteine | |||
| 1770 | S | S1.MhaGHORF4030P (100% identity) | GNGAYNNNNNNNRTGG | S2.Mha187VP |
| 1775 | integrase | |||
| 1780 | S | S2.MhaPORFGP (100% identity) | GNGAYNNNNNNNNTGT | S1.Mha187V |
| 1785 | transcriptional regulator | |||
| 1790 | M | M.Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | M.Mha187V |
| 1795 | R | Pba12565ORF1955P (100% identity) | GNGAYNNNNNNNNTGT | Mha187VP |
| 1800 | phosphatidylserine decarboxylase | |||
| 8290 | methyltransferase | |||
| 8295 | M | M.MhaH23ORF2958P (100% identity) | M.Mha187ORF8295P | |
| 8300 | S | S.PhaAI (100% identity) | S.Mha187ORF8295P | |
| 8305 | R | Mhas183ORF4955P (100% identity) | Mha187ORF8295P | |
| 8310 | bifunctional [glutamate--ammonia | |||
| 10815 | 211 aa hypothetical protein | |||
| 10820 | S | S2.Mhas184ORF2820P (100% identity) | S2.Mha187ORF10830P | |
| 10825 | S | S.Pba12565ORF10250P (100% identity) | CAACNNNNGT | S1.Mha187ORF10830P |
| 10830 | SAM-dependent methyltransferase | |||
| 10825 | restriction endonuclease subunit S | |||
| 10830 | M | M.Pba12565ORF10250P (100% identity) | CAACNNNNGT | M.Mha187IV |
| 10835 | methionine synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3470 | 3-dehydroquinate synthase | |||
| 3475 | M | M.Pba12565ORF3610P (100% identity) | GATC | M.Mha187I |
| 3480 | sodium-dependent transporter | |||
| 5685 | 85 aa hypothetical protein | |||
| 5690 | M | M.Mhas183ORF7435P (100% identity) | M.Mha187ORF5690P | |
| 5695 | 56 aa hypothetical protein | |||
| 5815 | DNA helicase | |||
| 5820 | M | M.Pba12565ORF7080P (100% identity) | M.Mha187ORF5820P | |
| 5825 | 71 aa hypothetical protein | |||
| 7355 | 71 aa hypothetical protein | |||
| 7360 | M | M.Pba12565ORF7080P (100% identity) | M.Mha187ORF7360P | |
| 7365 | DNA helicase | |||
| 8095 | DUF968 domain-containing protein | |||
| 8100 | M | M.Pba12565ORF4970P (100% identity) | M.Mha187ORF8100P | |
| 8105 | replication protein | |||
| 8230 | Com family DNA-binding transcriptional | |||
| 8235 | M | M.Pba12565ORF6605P (99% identity) | M1.Mha187ORF8235P | |
| 8240 | M | M.Pba12565ORF6600P (100% identity) | M2.Mha187ORF8235P | |
| 8245 | DUF4224 domain-containing protein | |||
| 8705 | 348 aa hypothetical protein | |||
| 8710 | M | M.Pba12565ORF4290P (100% identity) | M.Mha187ORF8710P | |
| 8715 | 235 aa hypothetical protein | |||
| 9280 | protein-transmembrane prediction | |||
| 9285 | R | Pba12565ORF8745P (100% identity) | GCATC | Mha187IIP |
| 9290 | M | M.Pba12565ORF8745P (100% identity) | GCATC | M.Mha187II |
| 9295 | 69 aa hypothetical protein | |||
| 10950 | S6 family igA-specific metalloendopeptidase | |||
| 10955 | M | M.Pba12565ORF10370P (100% identity) | M.Mha187ORF10955P | |
| 10960 | adhesin | |||
| 12735 | 188 aa hypothetical protein | |||
| 12740 | M | M.Pba12565ORF12115P (100% identity) | CTGAAG | M.Mha187ORF12740P |
| ??? | Eco57IR-like type IIS restriction enzyme | |||
| 12740 | SAM-dependent methyltransferase | |||
| ??? | RM | MhaPORFCP (99% identity) | CTGAAG | Mha187III |
| 12750 | helicase IV | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6435 | citrate synthase | |||
| 6440 | R | Pba12565ORF5515P (100% identity) | Mha187ORF6445P | |
| ??? | M | M.Pba12565ORF5515P (100% identity) | M.Mha187ORF6445P | |
| 6455 | DNA methylase N-4/N-6 | |||
| 7770 | adenine methyltransferase | |||
| 7775 | M | M.Pba12565ORF6755P (100% identity) | GTTAAT | M.Mha187ORF7775P |
| 7780 | R | Pba12565ORF6755P (100% identity) | GTTAAT | Mha187ORF7775P |
| 7785 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||