Phycisphaerae bacterium L21-RPul-D3 |
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Putative Phycisphaerae bacterium L21-RPul-D3 RM systems
Ref: Spring,S. et al. unpublished
REBASE ref # 19789
Complete sequence: 2,951,611 bp
GenBank #: CP019633
REBASE acronym: PbaD3
Org_num: 25276
All begin L21SP3_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 124 | Phosphoribosylamine--glycine ligase | |||
| 125 | R | Ssp115ORF12130P (55% identity) | PbaD3ORF125P | |
| 126 | Undecaprenyl-phosphate | |||
| 1003 | RNA polymerase sigma factor SigV | |||
| 1004 | M | M.PbaD4IV (91% identity) | CGCG | M.PbaD3II |
| 1005 | R | EsaBS9I (48% identity) | CGCG | PbaD3IIP |
| 1006 | Glucose-6-phosphate isomerase | |||
| 1100 | methyltransferase, FkbM family | |||
| 1101 | M | M.PbaD4ORF1231P (77% identity) | GATC | M.PbaD3ORF1101P |
| 1102 | 197 aa hypothetical protein | |||
| 1131 | integral membrane protein | |||
| 1132 | M | M.PbaD4ORF1187P (87% identity) | M.PbaD3ORF1132P | |
| 1133 | translation initiation factor Sui1 | |||
| 1265 | 127 aa hypothetical protein | |||
| 1266 | M | M.PbaD4I (80% identity) | TTTAAA | M.PbaD3V |
| 1267 | Aspartate aminotransferase | |||
| 1442 | ATP-dependent helicase HepA | |||
| 1443 | RM | Dma2077ORF42200P (44% identity) | PbaD3ORF1443P | |
| 1444 | 130 aa hypothetical protein | |||
| 1460 | 7-cyano-7-deazaguanine synthase | |||
| 1461 | M | M.PbaD4III (72% identity) | CTAG | M.PbaD3ORF1461P |
| 1462 | R | PbaD4IIIP (57% identity) | CTAG | PbaD3ORF1461P |
| 1463 | ABC transporter ATP-binding protein uup | |||
| 1682 | DNA polymerase III PolC-type | |||
| 1683 | M | M2.DhySh68ORF8620P (70% identity) | M1.PbaD3ORF1683P | |
| 1684 | M | M2.Spe19205IV (63% identity) | M2.PbaD3ORF1683P | |
| 1685 | RM | TspPP22ORF2820P (78% identity) | PbaD3ORF1683P | |
| 1686 | HMP/thiamine import ATP-binding protein | |||
| 1741 | 30S ribosomal protein S1 | |||
| 1742 | R | PbaD4ORF1862P (93% identity) | GTSAC | PbaD3IIIP |
| 1743 | M | M.PbaD4ORF1862P (88% identity) | GTSAC | M.PbaD3III |
| 1744 | Argininosuccinate lyase 1 | |||
| 1939 | The GLUG motif | |||
| 1940 | M | M.Mwh3033I (71% identity) | GTTAAC | M.PbaD3I |
| 1941 | R | Mko45378ORF20470P (63% identity) | GTTAAC | PbaD3IP |
| 1942 | tRNA pseudouridine synthase A | |||
| 2306 | DNA mismatch repair protein MutS | |||
| 2307 | M | M1.PbaD4VIP (84% identity) | CATG | M1.PbaD3IVP |
| 2308 | M | M2.PbaD4VIP (88% identity) | CATG | M2.PbaD3IVP |
| 2309 | transcriptional regulator | |||
| ??? | R | PbaD4VIP (86% identity) | CATG | PbaD3IVP |
| 2311 | tRNA modification GTPase MnmE | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1888 | NAD synthetase | |||
| 1889 | R | Pth23MrrP (52% identity) | PbaD3MrrP | |
| 1890 | Argininosuccinate lyase | |||