Clostridium cochlearium NCTC13027 |
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Putative Clostridium cochlearium NCTC13027 RM systems
Ref:
REBASE ref # 22501
Complete sequence: 2,435,419 bp
GenBank #: LT906477
REBASE acronym: Cco13027
Org_num: 25667
All begin SAMEA4530647_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 903 | phosphate regulon sensor protein phoR | |||
| 904 | R | Cco2909ORF924P (100% identity) | RGABNNNNNNCTG | Cco13027IIP |
| 905 | S | S.Cco2909ORF924P (100% identity) | RGABNNNNNNCTG | S.Cco13027II |
| 906 | M | M.Cco2909ORF924P (100% identity) | RGABNNNNNNCTG | M.Cco13027II |
| 907 | C | C.Cco2909ORF924P (100% identity) | C.Cco13027IIP | |
| 908 | phage/plasmid primase, P4 family, C-terminal | |||
| 933 | transposase | |||
| 934 | S | S.Cco2909ORF954P (100% identity) | S.Cco13027ORF934P | |
| 935 | gp2 | |||
| 936 | virulence protein | |||
| 937 | R | Cco2909ORF954P (100% identity) | Cco13027ORF934P | |
| 938 | Uncharacterised protein | |||
| 2100 | chromosome segregation protein | |||
| 2101 | S | S.Cco2909I (100% identity) | RTAYNNNNNCTTA | S.Cco13027I |
| 2102 | M | M.Cco2909I (100% identity) | RTAYNNNNNCTTA | M.Cco13027I |
| 2103 | R | Cte13ORF22350P (91% identity) | RTAYNNNNNCTTA | Cco13027IP |
| 2104 | Uncharacterized conserved protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 330 | Uncharacterised protein | |||
| 331 | M | M.Cco2909ORF341P (100% identity) | M.Cco13027ORF331P | |
| 332 | Uncharacterised protein | |||
| 1259 | CAAX amino terminal protease family protein | |||
| 1260 | R | Cco2909ORF1289P (100% identity) | Cco13027ORF1261P | |
| 1261 | M | M1.Cco2909ORF1289P (100% identity) | M1.Cco13027ORF1261P | |
| 1262 | M | M2.Cco2909ORF1289P (100% identity) | M2.Cco13027ORF1261P | |
| 1263 | Uncharacterised protein | |||
| 1686 | transposase | |||
| 1687 | M | M.Cco2909ORF1725P (100% identity) | M.Cco13027ORF1687P | |
| 1688 | R | Cco2909ORF1725P (100% identity) | Cco13027ORF1687P | |
| 1689 | Mg-dependent DNase | |||
| 1919 | spermidine synthase | |||
| 1920 | M | M.Cco2909II (100% identity) | CAAAAAR | M.Cco13027III |
| 1921 | chitooligosaccharide deacetylase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1300 | mutator mutT protein | |||
| 1301 | R | Cco2909ORF1330P (100% identity) | Cco13027ORF1301P | |
| 1302 | Uncharacterised protein | |||