Flavobacterium psychrophilum SSADA-1411 |
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Putative Flavobacterium psychrophilum SSADA-1411 RM systems
Ref: Imajoh,M. et al. unpublished
REBASE ref # 24765
GenBank #: BDSH00000000
REBASE acronym: Fps1411
Org_num: 25209
All begin FPS14_contig00002-, FPS14_contig00003-, FPS14_contig00004-, FPS14_contig00005-, FPS14_contig00011-, FPS14_contig00012-, FPS14_contig00014-, FPS14_contig00018-, FPS14_contig00019-, FPS14_contig00033-, FPS14_contig00035-, FPS14_contig00051-, FPS14_contig00076-, FPS14_contig00077-, FPS14_contig00081-, FPS14_contig00094-, FPS14_contig00098-, FPS14_contig00103-
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10 | 79 aa hypothetical protein | |||
| 11 | S | S.Fps1510ORF12P (24% identity) | S1.Fps1411ORF13P | |
| 12 | S | S.Fps1510ORF12P (73% identity) | S2.Fps1411ORF13P | |
| 13 | M | M.Fps1510ORF12P (99% identity) | M.Fps1411ORF13P | |
| 14 | 518 aa hypothetical protein | |||
| 14 | 244 aa hypothetical protein | |||
| ??? | S | S.Fps1510ORF13P (97% identity) | S.Fps1411ORF17P | |
| ??? | RM | Fps1510ORF12P (100% identity) | Fps1411ORF17P | |
| 19 | 222 aa hypothetical protein | |||
| 16 | 87 aa hypothetical protein | |||
| 17 | RM | Fps1510ORF12P (100% identity) | Fps1411ORF17P | |
| 69 | 221 aa hypothetical protein | |||
| 70 | C | C.FspN2155ORFFP (73% identity) | C.Fps1411ORF70P | |
| 71 | 204 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | 257 aa hypothetical protein | |||
| 2 | M | M.Fps1510ORF1P (100% identity) | M.Fps1411ORF2P | |
| 3 | energy-dependent translational throttle protein | |||
| 1 | 3-oxoadipate CoA-succinyl transferase subunit | |||
| 2 | S | Fco49512ORF9575P (14% identity) | S.Fps1411ORF3P | |
| 3 | R | FpsTRORFCP (49% identity) | Fps1411ORF3BP | |
| 4 | R | FpsTRORFCP (16% identity) | Fps1411ORF3AP | |
| 5 | 3-oxoacid CoA-transferase subunit A | |||
| 1 | 80 aa hypothetical protein | |||
| 2 | R | Fps1510ORF4P (100% identity) | Fps1411ORF3P | |
| 3 | M | M.Fps1510ORF3P (91% identity) | M.Fps1411ORF3P | |
| 1 | M | M.FpsTRI (100% identity) | GATATC | M.Fps1411ORF1P |
| 2 | R | Fps1510ORF1AP (100% identity) | Fps1411ORF1P | |
| 3 | 38 aa hypothetical protein | |||
| 2 | N-6 DNA methylase | |||
| ??? | M | M.Fps1510ORF3P (91% identity) | M.Fps1411ORF3P | |
| 5 | 45 aa hypothetical protein | |||
| 6 | M | M.FpsV433ORF10530P (100% identity) | CCNGG | M.Fps1411ORF6P |
| 7 | R | FpsVQ50ORF10495P (100% identity) | Fps1411ORF6P | |
| 8 | 466 aa hypothetical protein | |||
| 5 | 81 aa hypothetical protein | |||
| 6 | C | C.Fps1510ORF9P (100% identity) | C.Fps1411ORF8P | |
| 7 | R | Fps1510ORF9P (100% identity) | Fps1411ORF8P | |
| 8 | M | M.Fps1510ORF9P (84% identity) | M.Fps1411ORF8P | |
| 5 | 72 aa hypothetical protein | |||
| 6 | R | Fps1510ORF7P (100% identity) | Fps1411ORF7P | |
| ??? | M | M.Fps1510ORF7P (98% identity) | M.Fps1411ORF7P | |
| 29 | ABC transporter ATP-binding protein | |||
| ??? | R | Fps1510ORF20P (100% identity) | CCGG | Fps1411ORF31P |
| 31 | M | M.FpsVQ50ORF11250P (100% identity) | CCGG | M.Fps1411ORF31P |
| 32 | 332 aa hypothetical protein | |||
| 36 | 218 aa hypothetical protein | |||
| ??? | S | S.Fps1510ORF17P (61% identity) | S.Fps1411ORF40P | |
| 39 | 61 aa hypothetical protein | |||
| 40 | RM | Fps1510ORF17P (96% identity) | Fps1411ORF40P | |
| 41 | 150 aa hypothetical protein | |||
| 31 | 275 aa hypothetical protein | |||
| 32 | R | Fps1510ORF2P (100% identity) | Fps1411ORFAP | |
| ??? | M | M.Fps1510ORF2P (87% identity) | M.Fps1411ORFAP | |
| 38 | 129 aa hypothetical protein | |||
| ??? | RM | FpsV433ORF9590P (86% identity) | Fps1411ORF39P | |
| 43 | 389 aa hypothetical protein | |||
| 38 | DNA-damage-inducible protein D | |||
| 39 | RM | FpsV433ORF9590P (86% identity) | Fps1411ORF39P | |
| 40 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 55 | thymidylate synthase | |||
| ??? | M | M.Fps1510ORF49P (100% identity) | M.Fps1411ORF56P | |
| 57 | 73 aa hypothetical protein | |||
| 54 | DNA topoisomerase I | |||
| ??? | M | M.Fps1510ORFAP (95% identity) | M.Fps1411ORF55P | |
| 75 | 768 aa hypothetical protein | |||
| 76 | RM | Fps1510ORF3P (79% identity) | Fps1411ORF76AP | |
| 77 | RM | Fps1510ORF3P (18% identity) | Fps1411ORF76BP | |
| 78 | 83 aa hypothetical protein | |||
| 132 | 110 aa hypothetical protein | |||
| ??? | RM | Modification methylase | Fps1411ORF133BP | |
| 133 | RM | Fps17830ORF1050P (88% identity) | Fps1411ORF133AP | |
| 134 | mannose-1-phosphate guanylyltransferase | |||