Paracoccus aminovorans |
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Putative Paracoccus aminovorans RM systems
Ref: Wibberg,D. unpublished
REBASE ref # 17754
Complete sequence: 3,108,335 bp
GenBank #: LN832559
REBASE acronym: Pam7685
Org_num: 25609
All begin JCM7685_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2256 | IS21 family transposase | |||
| 2257 | M | M.Mma10ORF161P (45% identity) | M.Pam7685ORF2257P | |
| 2258 | S | S.MtuT4ORF910P (42% identity) | S.Pam7685ORF2257P | |
| 2259 | 186 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 68 | histidine kinase | |||
| ??? | M | M.RtoEL164ORFMP (72% identity) | M1.Pam7685ORF69P | |
| 70 | M | M2.Pal8512ORF2510P (88% identity) | M2.Pam7685ORF69P | |
| 71 | 110 aa hypothetical protein | |||
| 107 | 140 aa hypothetical protein | |||
| 108 | RM | Pst25392ORF980P (86% identity) | Pam7685ORF108P | |
| 109 | integrase | |||
| 114 | 162 aa hypothetical protein | |||
| 115 | M | M2.Pst25392ORF935P (99% identity) | M.Pam7685ORF115P | |
| ??? | Site-specific DNA methylase | |||
| 115 | DNA methylase | |||
| ??? | M | M1.PspD09ORF14660P (78% identity) | M.Pam7685ORFAP | |
| 117 | DNA methylase N-4/N-6 domain protein | |||
| ??? | Site-specific DNA methylase | |||
| 117 | M | M1.Pst25392ORF935P (99% identity) | M.Pam7685ORF117P | |
| 118 | membrane protein | |||
| 248 | 126 aa hypothetical protein | |||
| 249 | M | M2.Szo19623ORF16935P (95% identity) | M1.Pam7685ORF249P | |
| ??? | M | M1.Pye20ORF20175P (83% identity) | M2.Pam7685ORF249P | |
| 252 | membrane protein | |||
| 775 | IS5 family transposase | |||
| ??? | M | M.SdeCho1ORF21276P (67% identity) | M.Pam7685ORF776P | |
| 778 | IS21 family transposase | |||
| 1422 | 644 aa hypothetical protein | |||
| 1423 | M | M.Ssp609ORF3300P (91% identity) | M.Pam7685ORF1423P | |
| 1424 | 55 aa hypothetical protein | |||
| 2236 | 232 aa hypothetical protein | |||
| 2237 | M | M.Byu10071ORF1003666P (64% identity) | M.Pam7685ORF2237P | |
| 2238 | 385 aa hypothetical protein | |||
| 2586 | alkane 1-monooxygenase | |||
| 2587 | M | M.PamBM109ORFAP (98% identity) | M.Pam7685ORF2587P | |
| 2588 | ribonuclease HII | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1400 | 475 aa hypothetical protein | |||
| 1401 | R | Pfe100066McrCP (95% identity) | Pam7685McrCP | |
| 1402 | R | Pfe100066McrBP (64% identity) | Pam7685McrBP | |
| 1403 | nuclease | |||
| 2783 | 208 aa hypothetical protein | |||
| 2784 | R | PamBM109MrrP (57% identity) | Pam7685MrrP | |
| 2785 | 1-deoxy-D-xylulose-5-phosphate synthase | |||