Xenorhabdus nematophila ATCC 19061 |
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Putative Xenorhabdus nematophila ATCC 19061 RM systems
Ref: Goodrich-Blair,H. et al. unpublished
REBASE ref # 11554
| Sequence length: | GenBank #: | |
| Chromosome: | 4,432,590 bp | FN667742 (NC_014228) |
| plasmid XNC1_p: | 155,327 bp | FN667743 (NC_014170) |
REBASE acronym: XneP
Org_num: 5839
All begin XNC1_, XNC1_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17 | Zinc metalloprotease | |||
| 18 | R | XneAN61ORF19P (100% identity) | GAGNNNNNGTG | XnePIP |
| 19 | S | S.XneAN61ORF19P (100% identity) | GAGNNNNNGTG | S.XnePI |
| 20 | M | M.XneAN61ORF19P (100% identity) | GAGNNNNNGTG | M.XnePI |
| 21 | ATPase, AAA+ superfamily | |||
| 3927 | tRNA-dihydrouridine synthase A | |||
| 3928 | R | XneAN61ORF3786P (100% identity) | XnePORF3931P | |
| 3930 | S | S.XneAN61ORF3786P (100% identity) | S.XnePORF3931P | |
| 3931 | M | M.XneAN61ORF3786P (100% identity) | M.XnePORF3931P | |
| 3932 | 79 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 58 | D-ribulose-5-phosphate 3-epimerase | |||
| 59 | M | M.XneF1DamP (100% identity) | M.XnePDamP | |
| 60 | membrane protein | |||
| 1969 | 88 aa conserved hypothetical protein | |||
| 1970 | M | M.XneAN61ORF1908P (100% identity) | M.XnePORF1970P | |
| 1971 | 190 aa conserved hypothetical protein | |||
| 3087 | 66 aa hypothetical protein | |||
| 3088 | M | M.XneAN61ORF2970P (100% identity) | M.XnePORF3088P | |
| 3089 | 86 aa conserved hypothetical protein | |||
| 3091 | Conserved phage protein | |||
| 3092 | M | M.XneAN61ORF2974P (100% identity) | GATC | M.XnePORF3092P |
| 3093 | Gp34 | |||
| 3415 | 66 aa conserved hypothetical protein | |||
| 3417 | M | M.XneAN61ORF3290P (100% identity) | M.XnePORF3417P | |
| 3418 | proteic killer active protein | |||
| 3667 | 252 aa conserved hypothetical protein; putative | |||
| 3668 | M | M.XneAN61ORF3522P (88% identity) | CCWGG | M.XnePORF3668P |
| 3669 | V | V.XneAN61ORF3522P (100% identity) | V.XnePORF3668P | |
| 3670 | R | XneAN61ORF3522P (100% identity) | CCWGG | XnePORF3668P |
| 3671 | 230 aa hypothetical protein | |||
| plasmid XNC1_p | ||||
| 55 | 86 aa hypothetical protein | |||
| 56 | M | M.XneAN61ORF60P (100% identity) | CCNGG | M.XnePORF56P |
| 57 | 158 aa conserved hypothetical protein | |||
| 185 | 184 aa hypothetical protein | |||
| 187 | M | M.XneC23ORF14485P (100% identity) | M.XnePORF187P | |
| 188 | 83 aa hypothetical protein | |||