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Putative Neisseria gonorrhoeae NGSJH16 RM systems
Ref: Mac Aogain,M. et al. unpublished
REBASE ref # 24516
Contig set: 2,120,180 bp
GenBank #: NAGT00000000 (NZ_NAGT00000000)
REBASE acronym: NgoJH16
Org_num: 24582
All begin ORF_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
169 | Uncharacterized protein | |||
172 | M | M.NgoSH240ORFMP (100% identity) | M.NgoJH16ORFHP | |
175 | Damage-inducible protein D | |||
176 | 117 aa hypothetical protein | |||
177 | 104 aa hypothetical protein | |||
178 | Uncharacterized protein | |||
??? | S | S.NgoH035ORF2415P (100% identity) | S.NgoJH16ORFHP | |
186 | R | NgoNCORF566P (100% identity) | NgoJH16ORFHP | |
191 | Uncharacterized protein | |||
223 | 89 aa hypothetical protein | |||
224 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoJH16ORFGP |
227 | Uncharacterized protein | |||
228 | Uncharacterized protein | |||
229 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoJH16ORFGP |
230 | Uncharacterized protein | |||
231 | 68 aa hypothetical protein | |||
232 | R | NgoWPIP (100% identity) | GAGNNNNNTAC | NgoJH16ORFGP |
237 | 131 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoJH16ORFNP |
3 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoJH16ORFNP |
4 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoJH16ORFNP | |
5 | 112 aa hypothetical protein | |||
6 | 86 aa hypothetical protein | |||
??? | M | M.NgoJH7ORFGP (100% identity) | M.NgoJH16ORFLP | |
??? | R | NgoWSORF1801P (100% identity) | NgoJH16ORFLP | |
15 | V | V.Ngos1291ORF65P (100% identity) | V.NgoJH16ORFLP | |
19 | 81 aa hypothetical protein | |||
16 | N5-carboxyaminoimidazole ribonucleotide synthase | |||
20 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoJH16ORFFP |
22 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoJH16ORFFP |
23 | Anthranilate synthase component 1 | |||
15 | UvrABC system protein A | |||
24 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoJH16ORFAP |
27 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoJH16ORFAP |
29 | Uncharacterized protein | |||
32 | Uncharacterized protein | |||
33 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.NgoJH16ORFKP |
34 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.NgoJH16ORFKP |
35 | R | NgoWFIIP (100% identity) | GGTGA | NgoJH16ORFKP |
36 | 105 aa hypothetical protein | |||
29 | 59 aa hypothetical protein | |||
30 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoJH16ORFOP |
31 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoJH16ORFOP |
64 | GTPase Obg | |||
68 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoJH16ORFCP |
69 | R | NgoJH9ORFDP (100% identity) | NgoJH16ORFCP | |
70 | Cysteine--tRNA ligase | |||
123 | Uncharacterized protein | |||
??? | R | NgoWGORF7P (100% identity) | GATC | NgoJH16ORFIP |
??? | Methyltransferase | |||
??? | Restriction endonuclease | |||
??? | M | M.NgoWOORF8P (100% identity) | M.NgoJH16ORFJP | |
129 | Uncharacterized protein | |||
230 | Phenylalanine--tRNA ligase beta subunit | |||
234 | R | NgoWSORF391P (100% identity) | NgoJH16ORFPP | |
??? | M | M.NgoWSORF391P (100% identity) | M.NgoJH16ORFPP | |
240 | V | V.NgoWSORF391P (100% identity) | V.NgoJH16ORFPP | |
242 | Phenylalanine--tRNA ligase alpha subunit | |||
217 | Ribosome-recycling factor | |||
222 | M | M.NgoSH240ORFKP (100% identity) | GGCC | M.NgoJH16ORFEP |
225 | R | NgoPII restriction endonuclease | NgoJH16ORFEP | |
229 | 97 aa hypothetical protein | |||
326 | 3-isopropylmalate dehydratase small subunit | |||
327 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoJH16ORFMP |
328 | R | NgoWSORF784P (100% identity) | GGNNCC | NgoJH16ORFMP |
333 | 3-isopropylmalate dehydrogenase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1 | M | M.NgoWFI (97% identity) | CCACC | M.NgoJH16ORFBP |
6 | R | NgoWPIIP (100% identity) | CCACC | NgoJH16ORFBP |
9 | tRNA 2-thiocytidine biosynthesis protein TtcA | |||
28 | 138 aa hypothetical protein | |||
29 | M | M.NgoJH1ORFAP (99% identity) | GCAGA | M.NgoJH16ORFDP |
31 | R | NgoNCORF1272P (100% identity) | GCAGA | NgoJH16ORFDP |
33 | Uncharacterized protein |