Pseudomonas aeruginosa COPD6d |
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Putative Pseudomonas aeruginosa COPD6d RM systems
Ref: Lira,F. et al. Genome Announc (2017) In press
REBASE ref # 24501
Contig set: 5,905,838 bp
GenBank #: MWLC00000000 (NZ_MWLC00000000)
REBASE acronym: PaePD6d
Org_num: 24564
All begin BZY60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10970 | transcriptional regulator | |||
| 10975 | R | PaeZU31ORF26045P (100% identity) | PaePD6dORF10995P | |
| 10980 | 190 aa hypothetical protein | |||
| 10985 | nucleotidyltransferase | |||
| 10990 | S | S.PaeZU31ORF26045P (100% identity) | S.PaePD6dORF10995P | |
| ??? | M | M.PaeH11ORFBP (100% identity) | M.PaePD6dORF10995P | |
| 11000 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1305 | 79 aa hypothetical protein | |||
| 1310 | M | M.PspS53aORFAP (100% identity) | M.PaePD6dORF1310P | |
| 1315 | restriction endonuclease | |||
| 21700 | helicase SNF2 | |||
| 21705 | RM | PaeZY36ORF12335P (100% identity) | PaePD6dORF21705P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21075 | methyl-accepting chemotaxis protein | |||
| 21080 | M | M.EspJJBCORF3220P (81% identity) | M.PaePD6dORF21080P | |
| 21085 | DNA damage-inducible protein D | |||
| 21090 | R | PspChol1ORF447P (96% identity) | PaePD6dORF21080P | |
| 21095 | SIR2 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | type I restriction-modification system, M subunit | |||
| 11000 | R | PaeSH15MrrP (100% identity) | PaePD6dMrrP | |
| 11005 | transcriptional regulator | |||