Pseudomonas aeruginosa COPD2d |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa COPD2d RM systems
Ref: Lira,F. et al. Genome Announc (2017) In press
REBASE ref # 24501
Contig set: 6,191,379 bp
GenBank #: MWLA00000000 (NZ_MWLA00000000)
REBASE acronym: PaePD2d
Org_num: 24562
All begin BZY58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 28115 | metal-dependent hydrolase | |||
| 28120 | R | PaePAG5ORF16435P (100% identity) | PaePD2dORF28115P | |
| 28125 | S | S.PaePAG5ORF16435P (85% identity) | S.PaePD2dORF28115P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26820 | phosphoadenosine phosphosulfate reductase | |||
| 26825 | M | M.Pae8058ORF3583P (94% identity) | M.PaePD2dORF26825P | |
| 26830 | 83 aa hypothetical protein | |||
| 26890 | transcriptional regulator | |||
| 26895 | M | M.Pal426ORF41670P (89% identity) | M.PaePD2dORF26895P | |
| 26900 | late control protein | |||
| 23115 | 399 aa hypothetical protein | |||
| 23120 | V | V.PaeF066ORF13060P (83% identity) | V.PaePD2dORF23125P | |
| 23125 | M | M.PaeF066ORF13060P (96% identity) | M.PaePD2dORF23125P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 28100 | DNA repair protein RadC | |||
| 28105 | R | PaePAG5McrCP (100% identity) | PaePD2dMcrC2P | |
| 28110 | R | PaePAG5McrBP (100% identity) | PaePD2dMcrB2P | |
| 28115 | metal-dependent hydrolase | |||
| 23105 | integrase | |||
| ??? | R | PaeF066McrBP (100% identity) | PaePD2dMcrBP | |
| 23115 | R | Pae84950McrCP (94% identity) | PaePD2dMcrCP | |
| 23120 | 170 aa hypothetical protein | |||