Escherichia coli UMDKSU-2013-3-492A |
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Putative Escherichia coli UMDKSU-2013-3-492A RM systems
Ref: Noll,L.W. et al. unpublished
REBASE ref # 24468
Contig set: 5,671,624 bp
GenBank #: MVLF00000000 (NZ_MVLF00000000)
REBASE acronym: Eco3492A
Org_num: 24495
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 147 | Endoribonuclease SymE | |||
| 150 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco3492AORFDP |
| 152 | M | M.Eco4639ORFFP (100% identity) | TACNNNNNNNRTRTC | M.Eco3492AORFDP |
| 155 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco3492AORFDP |
| 158 | Uncharacterized protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | Holliday junction resolvase | |||
| 4 | M | M.Eco504ORF23805P (100% identity) | GATC | M.Eco3492AORFJP |
| 8 | replication protein | |||
| 2 | M | M.EcoVA2ORFDP (96% identity) | M.Eco3492AORFEP | |
| 4 | Uncharacterized protein | |||
| 3 | NinB | |||
| 6 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco3492AORFIP |
| 10 | Uncharacterized protein | |||
| 5 | Uncharacterized protein | |||
| 8 | M | M.EcoSTEC508ORF5750P (100% identity) | GATC | M.Eco3492AORFKP |
| 11 | Uncharacterized protein | |||
| 7 | 80 aa hypothetical protein | |||
| 8 | M | M.Eco5933AORFEP (100% identity) | M.Eco3492AORFCP | |
| 10 | 101 aa hypothetical protein | |||
| 22 | Uncharacterized protein | |||
| 23 | M | M.Sen58011ORF9805P (100% identity) | M.Eco3492AORFGP | |
| 24 | Uncharacterized protein | |||
| 16 | periplasmic protein | |||
| 17 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco3492AORFBP |
| 19 | 98 aa hypothetical protein | |||
| 72 | Uncharacterized protein | |||
| 75 | M | M.EcopO26ORF185P (100% identity) | SAY | M.Eco3492AORFHP |
| 80 | Uncharacterized protein | |||
| 70 | Recombination-associated protein RdgC | |||
| ??? | M | M.Eco3011ORFEP (100% identity) | M.Eco3492AORFFP | |
| 80 | Uncharacterized protein | |||
| 128 | Uncharacterized inner membrane transporter YedA | |||
| 129 | V | V.EcoSTEC346DcmP (100% identity) | V.Eco3492ADcmP | |
| 133 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco3492ADcmP |
| 135 | HD domain protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 126 | Ribulose-phosphate 3-epimerase | |||
| 127 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3492AORFAP |
| 130 | Cell division protein DamX | |||