Ref: Lucas,S. et al. unpublished

REBASE ref # 11548

Sequence length:GenBank #:
Chromosome: 3,526,903 bp CP001896 (NC_013851)
plasmid pALVIN01: 102,242 bp CP001897 (NC_013852)
plasmid pALVIN02: 39,929 bp CP001898 (NC_013862)

REBASE acronym: Avi180

Org_num: 5829

 

All begin Alvin_

Type I
ORF Gene Most similar Specificity Name
 
plasmid pALVIN01
 
3174 304 aa conserved hypothetical protein
3175 R AplC1ORF51010P (0% identity) Avi180ORF3176P
3176 M M.CviCB2ORF3770P (0% identity) M.Avi180ORF3176P
3177 S S.AinAB2ORF7495P (0% identity) S.Avi180ORF3176P
3178 303 aa hypothetical protein
 
plasmid pALVIN02
 
3258 PilT protein-like protein
3259 M M.Msp14BORFBP (0% identity) M.Avi180ORF3259P
3260 74 aa conserved hypothetical protein
3261 PilT protein domain protein
3262 S S.Sme4ORF590P (0% identity) S.Avi180ORF3259P
3263 75 aa hypothetical protein
3264 virulence protein, putative
3265 PilT protein domain protein
3266 R Msp14BORFBP (0% identity) Avi180ORF3259P
3267 integration host factor, beta subunit
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
177 ribosomal protein S9
178 RM Xor142ORF10765P (0% identity) Avi180ORF178P
179 DEAD-like helicase
 
1459 protein of unknown function DUF262
1460 R Bbr1334ORF2289P (0% identity) GTCGAC Avi180ORF1461P
1461 M M.Pae15442ORFBP (0% identity) GTCGAC M.Avi180ORF1461P
1462 secretion protein HlyD family protein
 
1612 YcfA family protein
1613 R Ssi40021ORF12100P (0% identity) CCTNAGG Avi180ORF1614P
1614 M M.GsuAM1ORFAP (0% identity) CCTNAGG M.Avi180ORF1614P
1615 479 aa hypothetical protein
 
2593 stress protein
2594 M M.RdeR2ORF2481P (0% identity) CTCGAG M.Avi180ORF2594P
2595 144 aa conserved hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
1537 glycosyl transferase family 2
1538 M M.CbaCRORF1343P (0% identity) M.Avi180ORF1538P
1539 387 aa conserved hypothetical protein
1540 199 aa conserved hypothetical protein
1541 R Tta154175ORFBP (0% identity) Avi180ORF1538P
1542 glycosyl transferase family 39
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
2955 548 aa hypothetical protein
2956 R Ath21654McrBP (0% identity) Avi180McrBP
2957 Chromosome segregation ATPase-like protein