Photobacterium damselae subsp. piscicida OT-51443 |
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Putative Photobacterium damselae subsp. piscicida OT-51443 RM systems
Ref: Hikima,J. et al. unpublished
REBASE ref # 24462
Contig set: 4,547,251 bp
GenBank #: BDMQ00000000 (NZ_BDMQ00000000)
REBASE acronym: Pda51443
Org_num: 24485
All begin PDPJ_1_, PDPJ_2_, PDPJ_4_, PDPJ_5_, PDPJ_7_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 223 | Ribosome biogenesis GTPase A | |||
| 224 | R | R2.Pda91197ORF1067P (100% identity) | Pda51443ORF229AP | |
| 225 | 91 aa hypothetical protein | |||
| 226 | 73 aa hypothetical protein | |||
| 227 | IS1 transposase | |||
| 228 | R | R1.Pda91197ORF1067P (100% identity) | Pda51443ORF229BP | |
| 229 | M | M.Pda91197ORF1067P (100% identity) | M.Pda51443ORF229P | |
| 230 | 53 aa hypothetical protein | |||
| 546 | Group II intron-encoded protein LtrA | |||
| 547 | R | R1.Pda91197ORF724P (100% identity) | Pda51443ORF551P | |
| 548 | Group II intron-encoded protein LtrA | |||
| 549 | 59 aa hypothetical protein | |||
| 550 | S | S.Pda91197ORF724P (100% identity) | S.Pda51443ORF551P | |
| 551 | M | M.Pda91197ORF724P (100% identity) | M.Pda51443ORF551P | |
| 552 | IS1 transposase | |||
| 1158 | 98 aa hypothetical protein | |||
| 1159 | R | Pda91197ORF114P (100% identity) | Pda51443ORF1162P | |
| 1160 | 345 aa hypothetical protein | |||
| 1161 | S | S.Pda91197ORF114P (100% identity) | S.Pda51443ORF1162P | |
| 1162 | M | N-6 DNA Methylase | M.Pda51443ORF1162P | |
| 1163 | 130 aa hypothetical protein | |||
| 1172 | 208 aa hypothetical protein | |||
| 1173 | M | M.Pda91197ORF103P (100% identity) | M.Pda51443ORF1173P | |
| 1174 | S | S.Pda91197ORF103P (100% identity) | S.Pda51443ORF1173P | |
| 1175 | R | Pda91197ORF103P (100% identity) | Pda51443ORF1173P | |
| 1176 | WLM domain protein | |||
| 1181 | 389 aa hypothetical protein | |||
| 1182 | M | M.Pda91197ORF94P (100% identity) | M.Pda51443ORF1182P | |
| 1183 | site-specific tyrosine recombinase XerC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13 | IS1 transposase | |||
| 14 | M | M.Pda5557ORF22960P (100% identity) | M.Pda51443ORF14P | |
| 15 | 62 aa hypothetical protein | |||
| 13 | 146 aa hypothetical protein | |||
| 14 | M | M.Pda5557ORF22960P (100% identity) | M.Pda51443ORF14P | |
| 15 | 148 aa hypothetical protein | |||
| 126 | 143 aa hypothetical protein | |||
| 127 | M | M.YrupYR1ORFCP (100% identity) | M.Pda51443ORF127P | |
| 128 | 100 aa hypothetical protein | |||
| 479 | hydrolase | |||
| 480 | M | M.Pda91197ORF813P (100% identity) | M.Pda51443ORF480P | |
| 481 | 3-oxoadipate enol-lactonase 2 | |||
| 645 | Transposase | |||
| 646 | M | M.Pda91197ORF625P (100% identity) | M.Pda51443ORF646P | |
| ??? | R | Pda91197ORF625BP (100% identity) | Pda51443ORF646BP | |
| 647 | 122 aa hypothetical protein | |||
| 648 | transposase | |||
| 649 | 98 aa hypothetical protein | |||
| 650 | transposase | |||
| 651 | 98 aa hypothetical protein | |||
| 652 | transposase | |||
| 653 | R | Pda91197ORF625AP (100% identity) | Pda51443ORF646AP | |
| 654 | 94 aa hypothetical protein | |||
| 1970 | 114 aa hypothetical protein | |||
| 1971 | RM | Vre8604ORF17255P (69% identity) | Pda51443ORF1971P | |
| 1972 | 647 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1112 | Ribulose-phosphate 3-epimerase | |||
| 1113 | M | M.Pda91197ORF3020P (100% identity) | M.Pda51443ORF1113P | |
| 1114 | 520 aa hypothetical protein | |||