Planktothricoides species SR001 |
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Putative Planktothricoides species SR001 RM systems
Ref: Tan,B. et al. unpublished
REBASE ref # 24430
Contig set: 7,056,742 bp
GenBank #: LIUQ00000000 (NZ_LIUQ00000000)
REBASE acronym: Psp001
Org_num: 24399
All begin AM228_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20825 | 115 aa hypothetical protein | |||
| 20830 | R | Cra505ORF3301P (65% identity) | Psp001ORF20870P | |
| 20835 | 67 aa hypothetical protein | |||
| 20840 | 103 aa hypothetical protein | |||
| 20845 | 189 aa hypothetical protein | |||
| 20850 | 69 aa hypothetical protein | |||
| 20855 | 144 aa hypothetical protein | |||
| 20860 | 297 aa hypothetical protein | |||
| 20865 | S | S.Mmo22980ORF90P (47% identity) | S.Psp001ORF20870P | |
| 20870 | M | M.Cra505ORF3301P (78% identity) | M.Psp001ORF20870P | |
| 20875 | pseudogene | |||
| 18605 | 62 aa hypothetical protein | |||
| 18610 | M | M.Pag204ORF40580P (69% identity) | M.Psp001ORF18610P | |
| 18615 | S | 286 aa hypothetical protein | S.Psp001ORF18610P | |
| 18620 | 416 aa hypothetical protein | |||
| 21415 | 76 aa hypothetical protein | |||
| 21420 | R | Csp7425ORF3148P (70% identity) | Psp001ORF21440P | |
| 21425 | S | S.CspB1200ORF7770P (49% identity) | S.Psp001ORF21440P | |
| 21430 | FdxN element excision controlling factor | |||
| 21435 | pseudogene | |||
| 21440 | M | M.Pru82ORF5078P (77% identity) | M.Psp001ORF21440P | |
| 21445 | 75 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27845 | M | M.Msp7113ORF6780P (28% identity) | M.Psp001ORF27845P | |
| 27850 | 80 aa hypothetical protein | |||
| 2410 | M | M.Msp7113ORF6065P (50% identity) | M.Psp001ORF2410P | |
| 2415 | lipid-A-disaccharide synthase | |||
| 23850 | RM | Sst15041ORFAP (69% identity) | Psp001ORF23850P | |
| 23855 | 388 aa hypothetical protein | |||
| 27705 | uncharacterized protein | |||
| 27710 | R | Nsp210ORF8015P (48% identity) | Psp001ORF27715P | |
| 27715 | M | M.Ski73ORF39570P (73% identity) | M.Psp001ORF27715P | |
| 27720 | 293 aa hypothetical protein | |||
| 14330 | cytochrome oxidase | |||
| 14335 | RM | Ocy1ORF2480P (60% identity) | Psp001ORF14335P | |
| 20535 | AAA+ family ATPase | |||
| 20540 | R | Ocy1ORF14765P (78% identity) | Psp001ORF20545P | |
| 20545 | M | M.Osp6506ORF3730015P (70% identity) | M.Psp001ORF20545P | |
| 20550 | 134 aa hypothetical protein | |||
| 26625 | ADP-heptose synthase | |||
| 26630 | M | M.PamM71ORF8915P (71% identity) | M1.Psp001ORF26630P | |
| 26635 | M | M.OspAP17ORF380P (64% identity) | M2.Psp001ORF26630P | |
| 26640 | 238 aa hypothetical protein | |||
| 13490 | 66 aa hypothetical protein | |||
| 13495 | M | M.Nsp870ORF19225P (60% identity) | M.Psp001ORF13495P | |
| 13500 | recombinase | |||
| 26750 | 229 aa hypothetical protein | |||
| 26755 | M | M.PspETS05ORFPP (67% identity) | M.Psp001ORF26755P | |
| 26760 | 109 aa hypothetical protein | |||
| 27060 | 1109 aa hypothetical protein | |||
| 27065 | RM | AplC1ORF61590P (85% identity) | Psp001ORF27065P | |
| 27070 | 62 aa hypothetical protein | |||
| 17025 | 151 aa hypothetical protein | |||
| 17030 | M | M.PspETS05ORFMP (66% identity) | M.Psp001ORF17030P | |
| 17035 | glycosyl hydrolase family 15 | |||
| 23505 | pseudogene | |||
| 23510 | M | M.Sxi21ORF11890P (66% identity) | M.Psp001ORF23510P | |
| 23515 | R | NbaLBB01ORF10155P (62% identity) | Psp001ORF23510P | |
| 23520 | glycine dehydrogenase | |||
| 15550 | pseudogene | |||
| 15555 | RM | Pte9214ORF4969P (58% identity) | Psp001ORF15555P | |
| 15560 | 85 aa hypothetical protein | |||
| 14365 | phospho-2-dehydro-3-deoxyheptonate aldolase | |||
| 14370 | RM | Asp43ORFIP (65% identity) | Psp001ORF14370P | |
| 14375 | pseudogene | |||
| 21400 | hydrogenase expression protein HypA | |||
| 21405 | M | M.Pru82ORF4293P (70% identity) | M.Psp001ORF21405P | |
| 21410 | pseudogene | |||
| 13570 | helicase | |||
| 13575 | M | M.Mva003ORF27360P (78% identity) | M.Psp001ORF13575P | |
| 13580 | 141 aa hypothetical protein | |||
| 6220 | DNA polymerase I | |||
| 6225 | M | M.Pte9214ORF3348P (89% identity) | M.Psp001ORF6225P | |
| 6230 | R | PagC7805ORFAP (49% identity) | Psp001ORF6225P | |
| 6235 | pseudogene | |||
| 15605 | 426 aa hypothetical protein | |||
| 15610 | M | M.Nsp9414ORF40730P (81% identity) | M.Psp001ORF15610P | |
| 15615 | 215 aa hypothetical protein | |||
| 7585 | 767 aa hypothetical protein | |||
| 7590 | M | M.Oac6304ORF1315P (76% identity) | M.Psp001ORF7590P | |
| 7595 | R | Oac6304ORF1315P (79% identity) | Psp001ORF7590P | |
| 7600 | HNH endonuclease | |||
| 22075 | 62 aa hypothetical protein | |||
| 22080 | M | M.Asp9108ORF14670P (60% identity) | M.Psp001ORF22080P | |
| 22085 | arginine biosynthesis protein ArgJ | |||
| 20395 | 139 aa hypothetical protein | |||
| 20400 | M | M.Tte7101ORF10480P (68% identity) | M.Psp001ORF20400P | |
| 20405 | R | Csp7822ORF5525P (60% identity) | Psp001ORF20400P | |
| 20410 | C | C.Csp7822ORF5525P (73% identity) | C.Psp001ORF20400P | |
| 20415 | 192 aa hypothetical protein | |||
| 15315 | Light-independent protochlorophyllide reductase | |||
| 15320 | M | M.Oac6304ORF2383P (64% identity) | M.Psp001ORF15320P | |
| 15325 | pseudogene | |||
| 23095 | 122 aa hypothetical protein | |||
| 23100 | RM | Ssp6312ORF3349P (41% identity) | Psp001ORF23100P | |
| 8155 | 63 aa hypothetical protein | |||
| 8160 | M | M.Ael3563ORF15550P (67% identity) | M.Psp001ORF8160P | |
| 8165 | pseudogene | |||
| 17505 | GTP-binding protein TypA | |||
| 17510 | M | M.NspIII (75% identity) | M.Psp001ORF17510P | |
| 17515 | R | Nsp0702ORF6235P (82% identity) | Psp001ORF17510P | |
| 17520 | pseudogene | |||
| 8175 | 180 aa hypothetical protein | |||
| 8180 | M | M.PspETS05ORFEP (65% identity) | M.Psp001ORF8180P | |
| 8185 | pseudogene | |||
| 17815 | 345 aa hypothetical protein | |||
| 17820 | M | M.LpnPORF1236P (48% identity) | M.Psp001ORF17820P | |
| 17825 | 72 aa hypothetical protein | |||
| 19940 | 371 aa hypothetical protein | |||
| 19945 | M | M.Pte9214DndCP (68% identity) | M.Psp001DndCP | |
| 19950 | DNA sulfur modification protein DndD | |||
| 19945 | sulfurtransferase DndC | |||
| 19950 | M | M.PamM71DndDP (58% identity) | M.Psp001DndDP | |
| 19955 | thiamine biosynthesis protein ThiF | |||
| 12725 | fatty-acid oxidation protein subunit alpha | |||
| 12730 | RM | Pps713ORF3245P (62% identity) | Psp001ORF12730P | |
| 12735 | phycocyanin | |||
| 8255 | transcriptional regulator | |||
| 8260 | R | CspESFC1ORFJP (86% identity) | Psp001ORF8265P | |
| 8265 | M | M.CspESFC1ORFJP (88% identity) | M.Psp001ORF8265P | |
| 8270 | 776 aa hypothetical protein | |||
| 13225 | 191 aa hypothetical protein | |||
| 13230 | M | M.PspETS05ORFRP (63% identity) | M.Psp001ORF13230P | |
| 13235 | 160 aa hypothetical protein | |||
| 8270 | 776 aa hypothetical protein | |||
| 8275 | M | M.GspPL17ORF18930P (49% identity) | M.Psp001ORF8275P | |
| 8280 | orotate phosphoribosyltransferase | |||
| 16070 | folate-biopterin transporter | |||
| 16075 | M | M.Csp7716ORF94390P (59% identity) | M.Psp001ORF16075P | |
| 16080 | pseudogene | |||
| 17605 | 636 aa hypothetical protein | |||
| 17610 | R | Csp7424ORF5156P (88% identity) | Psp001ORF17615P | |
| 17615 | M | M.Asp9108ORF5000P (69% identity) | M.Psp001ORF17615P | |
| 17620 | 1284 aa hypothetical protein | |||
| 13300 | glycerol acyltransferase | |||
| 13305 | M | M.PspETS05ORFQP (83% identity) | M.Psp001ORF13305P | |
| 13310 | 70 aa hypothetical protein | |||
| 16130 | GTP-binding protein | |||
| 16135 | R | Ppa514ORF3468P (48% identity) | Psp001ORF16140P | |
| 16140 | M | M.Mme286ORFK1P (51% identity) | M.Psp001ORF16140P | |
| 16145 | DNA polymerase III | |||
| 13350 | pseudogene | |||
| 13355 | RM | Mae4ORF9590P (66% identity) | Psp001ORF13355P | |
| 13360 | pseudogene | |||
| 12885 | 2-dehydropantoate 2-reductase | |||
| 12890 | M | M.PamM71ORF10580P (67% identity) | M.Psp001ORF12890P | |
| 12895 | 101 aa hypothetical protein | |||
| 1665 | dihydrodipicolinate reductase | |||
| 1670 | M | M.Nsp4103DndEP (72% identity) | M.Psp001DndEP | |
| 1675 | glutamate dehydrogenase | |||
| 14300 | peptidoglycan-binding protein | |||
| 14305 | M | M.Psp001ORF13575P (51% identity) | M.Psp001ORF14305P | |
| 8480 | ribulose 1,5-bisphosphate carboxylase small | |||
| 8485 | R | PspETS05ORFJP (55% identity) | Psp001ORF8490P | |
| 8490 | M | M.Oac6304ORF5673P (66% identity) | M.Psp001ORF8490P | |
| 8500 | metallophosphoesterase | |||
| 9075 | cysteine desulfurase | |||
| 9080 | M | M.Pru82ORF1097P (61% identity) | M.Psp001ORF9080P | |
| 9085 | restriction endonuclease | |||
| 9080 | DNA methylase | |||
| 9085 | R | Pte9214ORF2023P (60% identity) | Psp001ORF9085P | |
| 9090 | 245 aa hypothetical protein | |||
| 1885 | histidine kinase | |||
| 1890 | RM | Psp001ORF1920P (66% identity) | Psp001ORF1890BP | |
| 1895 | 80 aa hypothetical protein | |||
| 1900 | 69 aa hypothetical protein | |||
| 1905 | twitching motility protein PilT | |||
| 1910 | 106 aa hypothetical protein | |||
| 1915 | RM | Pmu1806ORFRAP (79% identity) | Psp001ORF1890AP | |
| 1920 | 413 aa hypothetical protein | |||
| 540 | 97 aa hypothetical protein | |||
| 545 | M | M.MspMC19ORF2545P (68% identity) | M.Psp001ORF545P | |
| 550 | GxxExxY protein | |||
| 1915 | N-6 DNA Methylase family | |||
| 1920 | RM | Nsp0039ORFJP (22% identity) | Psp001ORF1920P | |
| 1925 | 187 aa hypothetical protein | |||
| 5140 | pseudogene | |||
| 5145 | M | M.Fsp4106ORF29590P (78% identity) | M.Psp001ORF5145P | |
| 5150 | prolyl aminopeptidase | |||
| 4415 | virulence factor | |||
| 4420 | RM | Ael3563ORF10920P (63% identity) | Psp001ORF4420P | |
| 4425 | 218 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18590 | 147 aa hypothetical protein | |||
| 18595 | R | Ssp7003McrBP (27% identity) | Psp001McrBP | |
| 18600 | R | MprJHBMcrCP (45% identity) | Psp001McrCP | |
| 18605 | 62 aa hypothetical protein | |||