Escherichia coli UMDKSU-2014-5-888D |
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Putative Escherichia coli UMDKSU-2014-5-888D RM systems
Ref: Noll,L.W. et al. unpublished
REBASE ref # 24096
Contig set: 5,590,578 bp
GenBank #: MVMU00000000 (NZ_MVMU00000000)
REBASE acronym: Eco5888D
Org_num: 24289
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5 | P21 prophage-derived protein NinB | |||
| 7 | M | M.EcoS7380ORFIP (100% identity) | M.Eco5888DORFFP | |
| 11 | Protein ninE | |||
| 9 | Uncharacterized protein | |||
| 12 | M | M.Eco5941BORFEP (100% identity) | SAY | M.Eco5888DORFEP |
| 17 | Uncharacterized protein | |||
| 10 | Replication protein | |||
| 12 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.Eco5888DORFIP |
| 16 | Crossover junction endodeoxyribonuclease rusA | |||
| 33 | 64 aa hypothetical protein | |||
| ??? | M | M.EcoX21ORFCP (100% identity) | M.Eco5888DORFHP | |
| 39 | recombination protein | |||
| 27 | Inner membrane protein YhdU | |||
| 28 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco5888DORFAP |
| 30 | 98 aa hypothetical protein | |||
| 58 | 66 aa hypothetical protein | |||
| 59 | M | M.Eco5941BORFDP (100% identity) | M.Eco5888DORFDP | |
| 61 | 75 aa hypothetical protein | |||
| 124 | Uncharacterized inner membrane transporter YedA | |||
| 125 | V | V.Sdy49550DcmP (100% identity) | V.Eco5888DDcmP | |
| 129 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco5888DDcmP |
| 131 | Metal-dependent phosphohydrolase | |||
| 235 | Replication protein | |||
| 244 | M | M.EcoSO40ORF23900P (100% identity) | M.Eco5888DORFBP | |
| 245 | Uncharacterized protein | |||
| 764 | LexA DNA binding domain protein | |||
| 767 | M | M.EcoF104ORF2165P (100% identity) | GATC | M.Eco5888DORFGP |
| 770 | 90 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 124 | Ribulose-phosphate 3-epimerase | |||
| 125 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5888DORFCP |
| 128 | Cell division protein DamX | |||