Escherichia coli UMDKSU-2014-5-332A |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli UMDKSU-2014-5-332A RM systems
Ref: Noll,L.W. et al. unpublished
REBASE ref # 24096
Contig set: 5,659,023 bp
GenBank #: MVMK00000000 (NZ_MVMK00000000)
REBASE acronym: Eco5332A
Org_num: 24279
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2 | M | M.EcoZ1836ORF13250P (46% identity) | M.Eco5332AORFGP | |
| 4 | 101 aa hypothetical protein | |||
| 2 | M | DNA methyl transferase | M.Eco5332AORFHP | |
| 3 | 60 aa hypothetical protein | |||
| 4 | M | M.Eco57CORFFP (100% identity) | M.Eco5332AORFFP | |
| 6 | 82 aa hypothetical protein | |||
| 8 | Uncharacterized protein | |||
| 10 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco5332AORFKP |
| 15 | SOS-response repressor and protease LexA | |||
| 12 | Uncharacterized protein | |||
| 15 | M | M.EcoMEC0002ORF29305P (100% identity) | SAY | M.Eco5332AORFEP |
| 21 | Uncharacterized protein | |||
| 11 | SOS-response repressor and protease LexA | |||
| 14 | M | M.Sfl9783ORF197P (100% identity) | GATC | M.Eco5332AORFMP |
| 17 | Uncharacterized protein | |||
| 10 | Flagellar regulator flk | |||
| 12 | M | M.Eco5330AORFJP (100% identity) | M.Eco5332AORFLP | |
| 13 | 70 aa hypothetical protein | |||
| 23 | P21 prophage-derived protein NinB | |||
| 25 | M | M.EcoS7380ORFIP (100% identity) | M.Eco5332AORFDP | |
| 29 | Protein ninE | |||
| 37 | 64 aa hypothetical protein | |||
| 40 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco5332AORFIP |
| 43 | recombination protein | |||
| 27 | Inner membrane protein YhdU | |||
| 28 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco5332AORFAP |
| 30 | 98 aa hypothetical protein | |||
| 29 | HD domain protein | |||
| 30 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.Eco5332ADcmP |
| 32 | V | V.Sdy49550DcmP (100% identity) | V.Eco5332ADcmP | |
| 36 | Uncharacterized inner membrane transporter YedA | |||
| 107 | Uncharacterized protein | |||
| 108 | M | M.Sfl426ORFAP (100% identity) | M.Eco5332AORFCP | |
| 111 | R | EcoST9532ORF19285P (100% identity) | Eco5332AORFCP | |
| 112 | SsrA-binding protein | |||
| 77 | Recombination-associated protein RdgC | |||
| 80 | M | M.Eco5330AORFHP (100% identity) | M.Eco5332AORFJP | |
| 87 | Uncharacterized protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 124 | Ribulose-phosphate 3-epimerase | |||
| 125 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco5332AORFBP |
| 128 | Cell division protein DamX | |||