Escherichia coli O157:H7 LEN03-5497-2 |
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Putative Escherichia coli O157:H7 LEN03-5497-2 RM systems
Ref: Diarra,M.S. and Rehman,M.A. unpublished
REBASE ref # 24017
Contig set: 5,325,325 bp
GenBank #: MWVM00000000 (NZ_MWVM00000000)
REBASE acronym: Eco54972
Org_num: 24096
All begin B1765_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3705 | 113 aa hypothetical protein | |||
| 3710 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco54972ORF3715P |
| 3715 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco54972ORF3715P |
| 3720 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco54972ORF3715P |
| 3725 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 28405 | protein ninB | |||
| 28410 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco54972ORF28410P |
| 28415 | 40 aa hypothetical protein | |||
| 23180 | 101 aa hypothetical protein | |||
| 23185 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco54972ORF23185P | |
| 23190 | 73 aa hypothetical protein | |||
| 25380 | lipoprotein | |||
| 25385 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco54972ORF25385P | |
| 25400 | 61 aa hypothetical protein | |||
| 3450 | helicase | |||
| 3455 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco54972ORF3455P |
| 2080 | ribulose-phosphate 3-epimerase | |||
| 2085 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco54972DamP |
| 2090 | protein DamX | |||
| 20905 | drug/metabolite exporter YedA | |||
| 20910 | V | V.EcosPA8DcmP (100% identity) | V.Eco54972DcmP | |
| 20915 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco54972DcmP |
| 20920 | phosphohydrolase | |||
| 17980 | 164 aa hypothetical protein | |||
| 17985 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco54972ORF17985P |
| 17990 | LexA family transcriptional regulator | |||
| 18955 | integrase | |||
| 18960 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco54972ORF18970P |
| ??? | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco54972ORF18970P |
| 18970 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco54972ORF18970P |
| 18975 | 87 aa hypothetical protein | |||
| 14025 | Fis family transcriptional regulator | |||
| 14030 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco54972ORF14030P |
| 14035 | transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3695 | 293 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco54972GmrDP | |
| 3705 | 113 aa hypothetical protein | |||