Escherichia coli O157:H7 LEN02-0647-1 |
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Putative Escherichia coli O157:H7 LEN02-0647-1 RM systems
Ref: Diarra,M.S. and Rehman,M.A. unpublished
REBASE ref # 24017
Contig set: 5,325,611 bp
GenBank #: MWVK00000000 (NZ_MWVK00000000)
REBASE acronym: Eco6471
Org_num: 24094
All begin B1763_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4100 | 113 aa hypothetical protein | |||
| 4105 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco6471ORF4110P |
| 4110 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco6471ORF4110P |
| 4115 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco6471ORF4110P |
| 4120 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21875 | phosphohydrolase | |||
| 21880 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco6471DcmP |
| 21885 | V | V.EcosPA8DcmP (100% identity) | V.Eco6471DcmP | |
| 21890 | drug/metabolite exporter YedA | |||
| 28340 | protein ninB | |||
| 28345 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco6471ORF28345P |
| 28350 | 40 aa hypothetical protein | |||
| 25115 | 87 aa hypothetical protein | |||
| 25120 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco6471ORF25120P |
| ??? | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco6471ORF25120P |
| 25130 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco6471ORF25120P |
| 25135 | integrase | |||
| 25935 | lipoprotein | |||
| 25940 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco6471ORF25940P | |
| 25955 | 61 aa hypothetical protein | |||
| 24935 | 73 aa hypothetical protein | |||
| 24940 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco6471ORF24940P | |
| 24945 | 101 aa hypothetical protein | |||
| 3845 | helicase | |||
| 3850 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco6471ORF3850P |
| 220 | ribulose-phosphate 3-epimerase | |||
| 225 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco6471DamP |
| 230 | protein DamX | |||
| 10970 | LexA family transcriptional regulator | |||
| 10975 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco6471ORF10975P |
| 10980 | 164 aa hypothetical protein | |||
| 13365 | Fis family transcriptional regulator | |||
| 13370 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco6471ORF13370P |
| 13375 | transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4090 | 293 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco6471GmrDP | |
| 4100 | 113 aa hypothetical protein | |||