Vitreoscilla filiformis ATCC 15551 |
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Putative Vitreoscilla filiformis ATCC 15551 RM systems
Ref: Contreras,S. et al. unpublished
REBASE ref # 25578
| Sequence length: | GenBank #: | |
| Chromosome: | 3,464,895 bp | CP022423 |
| plasmid pVF1: | 282,640 bp | CP022424 |
| plasmid pVF2: | 40,016 bp | CP022425 |
REBASE acronym: Vfi15551
Org_num: 25353
All begin VITFI_CDS, VITFI_RNF
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2418 | metal-dependent hydrolase | |||
| 2419 | R | Sli112ORF16565P (73% identity) | Vfi15551ORF2422P | |
| 2420 | phosphate phosphatase | |||
| 2421 | S | S.Kqa4175ORF24105P (60% identity) | S.Vfi15551ORF2422P | |
| 2422 | M | M.Vsp20I (68% identity) | M.Vfi15551ORF2422P | |
| 2423 | Glutamate racemase | |||
| 2838 | cytochrome oxidase I | |||
| 2839 | M | M.HspDCM1ORF2735P (89% identity) | M.Vfi15551ORF2839P | |
| 2840 | ATPase AAA | |||
| 2841 | 368 aa hypothetical protein | |||
| ??? | S | S.AthA01ORFKP (55% identity) | S.Vfi15551ORF2839P | |
| 2843 | 145 aa hypothetical protein | |||
| 2844 | R | Mje19629ORF14585P (81% identity) | Vfi15551ORF2839P | |
| 2845 | 4-diphosphocytidyl-2C-methyl-D-erythritol | |||
| plasmid pVF1 | ||||
| 3355 | 327 aa hypothetical protein | |||
| ??? | S | S.Lsp112ORFEP (30% identity) | S.Vfi15551ORF3357P | |
| 3357 | M | M.MunFAM5ORF1959P (84% identity) | M.Vfi15551ORF3357P | |
| 3358 | R | AspDW039ORF130P (81% identity) | Vfi15551ORF3357P | |
| 3359 | sigma-54 factor interaction domain-containing | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 93 | 253 aa hypothetical protein | |||
| 94 | M | M.Vfi15551ORF3241P (100% identity) | M.Vfi15551ORF94P | |
| 95 | 77 aa hypothetical protein | |||
| 553 | 142 aa hypothetical protein | |||
| 554 | RM | PspMPC6ORF31805P (67% identity) | Vfi15551ORF554P | |
| 555 | 150 aa hypothetical protein | |||
| 1043 | Ribulose-bisphosphate carboxylase small chain | |||
| 1044 | M | M.Vfi15551ORF94P (100% identity) | M.Vfi15551ORF1044P | |
| 1045 | 77 aa hypothetical protein | |||
| 1549 | 77 aa hypothetical protein | |||
| 1550 | M | M.Vfi15551ORF94P (100% identity) | M.Vfi15551ORF1550P | |
| 1551 | Protein O-GlcNAc transferase | |||
| 2193 | aspartate kinase | |||
| 2194 | RM | RsoRSCMORF40P (84% identity) | Vfi15551ORF2194P | |
| 2195 | DNA (cytosine-5-)-methyltransferase restriction | |||
| 2194 | 1034 aa hypothetical protein | |||
| 2195 | M | M.AavCOLB1ORF15035P (85% identity) | M.Vfi15551ORF2195P | |
| 2196 | 88 aa hypothetical protein | |||
| 46 | pseudogene | |||
| ??? | R | TspHSM34ORF12470P (37% identity) | Vfi15551ORFAP | |
| ??? | M | M.Oac6304ORF5673P (50% identity) | M.Vfi15551ORFAP | |
| 2256 | retron-type reverse transcriptase | |||
| 2566 | 600 aa hypothetical protein | |||
| 2567 | M | M.Cte001ORF4355P (49% identity) | M.Vfi15551ORF2567P | |
| 2568 | Histone deacetylase | |||
| 3186 | abortive infection protein | |||
| 3187 | RM | SspFB5ORF41840P (74% identity) | Vfi15551ORF3187P | |
| 3188 | 175 aa hypothetical protein | |||
| 3240 | 196 aa hypothetical protein | |||
| 3241 | M | M.Vfi15551ORF94P (100% identity) | M.Vfi15551ORF3241P | |
| 3242 | 77 aa hypothetical protein | |||
| plasmid pVF2 | ||||
| 3537 | 59 aa hypothetical protein | |||
| 3538 | R | UbapRSB105ORFAP (100% identity) | CTCGAG | Vfi15551ORF3539P |
| 3539 | M | M.PaeR7I (91% identity) | CTCGAG | M.Vfi15551ORF3539P |
| 3540 | recombinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 85 | DNA-binding protein | |||
| 86 | M | M.Bpr5ORF4300P (61% identity) | M.Vfi15551ORF86P | |
| 87 | R | Osp83ORF3875P (69% identity) | Vfi15551ORF86P | |
| 88 | 142 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1412 | Sulfate-transporting ATPase sulfate ABC | |||
| ??? | R | Msp95MrrP (66% identity) | Vfi15551MrrP | |
| 1414 | ATP-dependent DNA helicase RecG | |||