Bacteroides caccae ATCC 43185 |
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Putative Bacteroides caccae ATCC 43185 RM systems
Ref: Wang,J.R. unpublished
REBASE ref # 24901
Complete sequence: 4,570,803 bp
GenBank #: CP022412
REBASE acronym: Bca43185
Org_num: 25347
All begin CGC64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2050 | 504 aa hypothetical protein | |||
| 2055 | R | Msa17ORFF1P (100% identity) | Bca43185ORF2080P | |
| 2060 | S | S1.Msa17ORFF1P (100% identity) | S1.Bca43185ORF2080P | |
| 2065 | integrase | |||
| 2070 | transcriptional regulator | |||
| 2075 | S | S2.Msa17ORFF1P (100% identity) | S2.Bca43185ORF2080P | |
| 2080 | M | M2.Msa17ORFF1P (100% identity) | M2.Bca43185ORF2080P | |
| ??? | M | M1.Msa17ORFF1P (100% identity) | M1.Bca43185ORF2080P | |
| 2090 | XRE family transcriptional regulator | |||
| 8805 | ATP-binding protein | |||
| 8810 | M | M1.Msa17ORFWP (100% identity) | M1.Bca43185ORF1995P | |
| 8815 | M | M2.Bun901ORF13185P (100% identity) | M2.Bca43185ORF1995P | |
| 8820 | S | S2.Msa17ORFWP (100% identity) | S1.Bca43185ORF1995P | |
| 8825 | integrase | |||
| 8830 | S | S2.BccORFFP (100% identity) | S2.Bca43185ORF1995P | |
| 8835 | R | Msa17ORFWP (100% identity) | Bca43185ORF1995P | |
| 8840 | DUF262 domain-containing protein | |||
| 15325 | AraC family transcriptional regulator | |||
| 15330 | C | C.Msa17ORFW1P (100% identity) | C.Bca43185ORF2463P | |
| 15335 | R | Msa17ORFW1P (96% identity) | Bca43185ORF2463P | |
| 15340 | HNH endonuclease | |||
| 15345 | M | M.Msa17ORFW1P (100% identity) | M.Bca43185ORF2463P | |
| ??? | S | S4.Msa17ORFW1P (100% identity) | S1.Bca43185ORF2463P | |
| 15355 | S | S3.Msa17ORFW1P (100% identity) | S2.Bca43185ORF2463P | |
| 15360 | S | S2.Msa17ORFW1P (100% identity) | S3.Bca43185ORF2463P | |
| 15365 | integrase | |||
| 15370 | S | S1.Msa17ORFW1P (100% identity) | S4.Bca43185ORF2463P | |
| 15375 | 134 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 510 | DGQHR domain-containing protein | |||
| 515 | M | M.PmeBin96ORFEP (100% identity) | M.Bca43185ORF515P | |
| 520 | clindamycin resistance transfer factor BtgB | |||
| ??? | SAM-dependent DNA methyltransferase | |||
| 2090 | C | C.Msa17ORFG1P (100% identity) | C.Bca43185ORF2090P | |
| 2095 | recombinase | |||
| 3150 | site-specific integrase | |||
| 3155 | R | Bca43185aORF3115P (100% identity) | Bca43185ORF3165P | |
| 3160 | 283 aa hypothetical protein | |||
| 18735 | DNA methyltransferase | |||
| 3165 | M | M.Bca43185aORF3125P (100% identity) | M.Bca43185ORF3165P | |
| 3170 | 64 aa hypothetical protein | |||
| 10675 | 111 aa hypothetical protein | |||
| 10680 | M | M.Msa17ORFI2P (100% identity) | M.Bca43185ORF1192P | |
| 10685 | 182 aa hypothetical protein | |||
| 10720 | 184 aa hypothetical protein | |||
| 10725 | M | M.Msa17ORFJ2P (100% identity) | M.Bca43185ORF1182P | |
| 10730 | sulfate adenylate transferase | |||
| 14255 | integrase | |||
| 14260 | R | Msa17ORFZ1P (100% identity) | Bca43185ORF448P | |
| 14265 | M | M2.Msa17ORFZ1P (100% identity) | M2.Bca43185ORF448P | |
| 14270 | M | M1.PmeBin35ORFAP (100% identity) | M1.Bca43185ORF448P | |
| 14275 | carbamoyl-phosphate synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8760 | 144 aa hypothetical protein | |||
| 8765 | R | Msa17McrBP (100% identity) | Bca43185McrBP | |
| 8770 | R | PmeBin35McrCP (100% identity) | Bca43185McrCP | |
| 8775 | 247 aa hypothetical protein | |||