Vibrio parahaemolyticus MVP1 |
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Putative Vibrio parahaemolyticus MVP1 RM systems
Ref: Foo,S.M. et al. unpublished
REBASE ref # 24086
| Sequence length: | GenBank #: | |
| Chromosome: | 5,230,330 bp | MQMQ00000000 (NZ_MQMQ00000000) |
| chromosome 1: | 3,446,010 bp | CP043421 |
| plasmid pVa: | 69,047 bp | CP043423 |
REBASE acronym: VpaMVP1
Org_num: 23866
All begin BSR23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21955 | 334 aa hypothetical protein | |||
| 21960 | S | S.VpaMVP6ORF14835P (100% identity) | S.VpaMVP1ORF21965P | |
| 21965 | M | M.VpaMVP6ORF14835P (100% identity) | M.VpaMVP1ORF21965P | |
| 21970 | 132 aa hypothetical protein | |||
| 21975 | elongation factor Ts | |||
| 21980 | multidrug transporter | |||
| 21985 | 428 aa hypothetical protein | |||
| 21990 | R | VpaMVP6ORF14835P (100% identity) | VpaMVP1ORF21965P | |
| 21995 | C | C.Vvu053ORF884P (100% identity) | C.VpaMVP1ORF21965P | |
| 22000 | DNA repair protein | |||
| chromosome 1 | ||||
| 12970 | DNA repair protein | |||
| 12975 | C | C.Vvu053ORF884P (100% identity) | C.VpaMVP1ORF21965P | |
| 12980 | R | VpaMVP6ORF14835P (100% identity) | VpaMVP1ORF21965P | |
| 12985 | 428 aa hypothetical protein | |||
| 12990 | multidrug transporter | |||
| 12995 | elongation factor Ts | |||
| 13000 | 49 aa hypothetical protein | |||
| 13005 | 36 aa hypothetical protein | |||
| 13010 | 132 aa hypothetical protein | |||
| 13015 | M | M.VpaMVP6ORF14835P (100% identity) | M.VpaMVP1ORF21965P | |
| 13020 | S | S.VpaMVP6ORF14835P (100% identity) | S.VpaMVP1ORF21965P | |
| 13025 | 334 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22955 | integrase | |||
| 22960 | M | M.VpaMVP6ORF22225P (100% identity) | M.VpaMVP1ORF22960P | |
| 22965 | R | VpaMVP6ORF22225P (100% identity) | VpaMVP1ORF22960P | |
| 22970 | 392 aa hypothetical protein | |||
| 5965 | cell division protein DamX | |||
| 5970 | M | M.VpaMVP6DamP (100% identity) | GATC | M.VpaMVP1DamP |
| 5975 | ribulose-phosphate 3-epimerase | |||
| chromosome 1 | ||||
| 2200 | AAA family ATPase | |||
| 2205 | M | M.VpaMVP6DamP (100% identity) | GATC | M.VpaMVP1DamP |
| 2210 | ribulose-phosphate 3-epimerase | |||
| 6100 | tyrosine-type recombinase/integrase | |||
| 6105 | M | M.VpaMVP6ORF22225P (100% identity) | M.VpaMVP1ORF22960P | |
| 6110 | R | VpaMVP6ORF22225P (100% identity) | VpaMVP1ORF22960P | |
| 6115 | protein-PII uridylyltransferase | |||
| plasmid pVa | ||||
| 26450 | IS5 family transposase | |||
| 26455 | M | M.VpaWY3ORFCP (88% identity) | M.VpaMVP1ORF26455P | |
| 26460 | 366 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 115 | phosphohydrolase | |||
| 120 | R | VpaMVP6ORF2460P (100% identity) | VpaMVP1ORF125P | |
| 125 | M | M.VpaMVP6ORF2460P (100% identity) | M.VpaMVP1ORF125P | |
| 130 | DNA helicase UvrD | |||
| chromosome 1 | ||||
| 4165 | ATP-dependent helicase | |||
| 4170 | M | M.VpaMVP6ORF2460P (96% identity) | M.VpaMVP1ORF4170P | |
| 4175 | R | VpaMVP6ORF2460P (100% identity) | VpaMVP1ORF4170P | |
| 4180 | phosphohydrolase | |||