Salmonella enterica subsp. enterica serovar Typhimurium 14028S |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium 14028S RM systems
Ref: Jarvik,T. et al. J. Bacteriol. 192 (2), 560-567 (2010)
REBASE ref # 11344
| Sequence length: | GenBank #: | |
| Chromosome: | 4,870,265 bp | CP001363 |
| plasmid unnamed: | 93,832 bp | CP001362 |
REBASE acronym: SenT1
Org_num: 5627
All begin STM14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5435 | 43 aa hypothetical protein | |||
| 5436 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenT1ORF5437P |
| 5437 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenT1ORF5437P |
| 5438 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenT1ORF5437P |
| 5439 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1434 | Ead-like protein | |||
| 1435 | M | M.Sens29958ORF6205P (100% identity) | M.SenT1ORF1435P | |
| 1436 | Eaa-like protein | |||
| 2412 | 306 aa hypothetical protein | |||
| 2413 | V | V.StyUK1DcmP (100% identity) | V.SenT1DcmP | |
| 2414 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenT1DcmP |
| 2415 | 231 aa hypothetical protein | |||
| 4083 | DNA-binding protein Fis | |||
| 4084 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenT1ORF4084P |
| 4085 | periplasmic protein | |||
| 4195 | ribulose-phosphate 3-epimerase | |||
| 4196 | M | M.StyTDamP (100% identity) | GATC | M.SenT1DamP |
| 4197 | 425 aa hypothetical protein | |||
| 5391 | ABC-type sugar/spermidine/putrescine | |||
| 5392 | RM | StyUK1IV (100% identity) | GATCAG | SenT1ORF5392P |
| 5393 | DNA repair ATPase | |||
| plasmid unnamed | ||||
| 5580 | cytoplasmic protein | |||
| 5581 | M | M.StyUK1ORFAP (100% identity) | M.SenT1ORF5581P | |
| 5582 | cytoplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 416 | inner membrane protein | |||
| 417 | M | M.StyUK1I (100% identity) | CAGAG | M.SenT1ORF417P |
| 418 | R | StyUK1IP (100% identity) | CAGAG | SenT1ORF417P |
| 419 | 44 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5438 | type I restriction enzyme EcoKI subunit R | |||
| 5439 | R | StyUK1MrrP (100% identity) | SenT1MrrP | |
| 5440 | 45 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2466 | crossover junction protein | |||
| 2467 | M | M.StyUK1V (100% identity) | GATC | M.SenT1ORF2467P |
| 2468 | transcriptional activator | |||