Xanthomonas citri pv. vignicola CFBP7112 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xanthomonas citri pv. vignicola CFBP7112 RM systems
Ref: Ruh,M. et al. unpublished
REBASE ref # 25953
| Sequence length: | GenBank #: | |
| Chromosome: | 5,048,412 bp | CP022267 |
| plasmid plA: | 65,309 bp | CP022268 |
REBASE acronym: Xci7112
Org_num: 25304
All begin XcvCFBP7112P_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6315 | restriction endonuclease | |||
| 6320 | M | M.XhoVT106ORF16110P (97% identity) | GAGNNNNNNCTT | M.Xci7112ORF6320P |
| 6325 | hydroxyacid dehydrogenase | |||
| 6330 | S | S.Xeu66bORF1820P (99% identity) | GAGNNNNNNCTT | S.Xci7112ORF6320P |
| 6335 | R | Xeu930ORF16695P (99% identity) | GAGNNNNNNCTT | Xci7112ORF6320P |
| 6340 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5830 | phage portal protein | |||
| 5840 | M | M2.Xca33086ORF3820P (91% identity) | M.Xci7112ORF5840P | |
| 5845 | DNA polymerase V subunit UmuC | |||
| 8205 | IS3 family transposase | |||
| 8210 | RM | SspBIO128ORF5545P (67% identity) | Xci7112ORF8210P | |
| 8215 | integrase | |||
| plasmid plA | ||||
| 22520 | CopG family transcriptional regulator | |||
| 22525 | M | M.XpeLH3ORF23860P (99% identity) | M.Xci7112ORF22525P | |
| 22530 | 66 aa hypothetical protein | |||
| 22535 | R | XpeLH3ORF23860P (100% identity) | Xci7112ORF22525P | |
| 22540 | 121 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2870 | AAA family ATPase | |||
| 2875 | M | M.Xho305ORF3255P (94% identity) | M.Xci7112ORF2875P | |
| 2880 | R | Xtr843ORF18435P (90% identity) | Xci7112ORF2875P | |
| 2885 | type III secretion system effector protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6310 | plasmid stabilization protein | |||
| 6315 | R | Xci2913MrrP (97% identity) | Xci7112MrrP | |
| 6320 | DNA methyltransferase | |||